Yarrowia lipolytica: 2910539
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Entry
2910539 CDS
T01033
Symbol
YALI2_D01076g
Name
(RefSeq) Pre-mRNA-splicing factor RSE1
KO
K12830
splicing factor 3B subunit 3
Organism
yli
Yarrowia lipolytica
Pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2910539 (YALI2_D01076g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
2910539 (YALI2_D01076g)
03041 Spliceosome [BR:
yli03041
]
2910539 (YALI2_D01076g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2910539 (YALI2_D01076g)
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
2910539 (YALI2_D01076g)
Spliceosome [BR:
yli03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
2910539 (YALI2_D01076g)
Complex B
2910539 (YALI2_D01076g)
Complex C
U2 SnRNP specific factors
2910539 (YALI2_D01076g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
2910539 (YALI2_D01076g)
TFTC complex
2910539 (YALI2_D01076g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
2910539
NCBI-ProteinID:
XP_502337
UniProt:
Q6CAH5
A0A1D8NCZ7
LinkDB
All DBs
Position
D:complement(410144..413509)
Genome browser
AA seq
1121 aa
AA seq
DB search
MLYHSTLRSSSPKSAICGRFSGKSQQVITLSSTGNALYLYSHDGDTGTVTLIHTHLTHCQ
VREIRAFRLPGLKKDYVIASSDSGVISVLEFRHNRFVSLHKEAYGRSGIRRVVPGEFLAV
DPKGRACMLASVEKSKLVYVLNRQGADIVISSPLEAHTSCVTYFVVACDVAYENPVFAAI
ETPVGETSPGKQLVFYELDLGLNHVIRKAPVDIPNSTSHVTAVPGGTDGPGGVLVFSTNA
IVHHVAGAAGGASTGAAGSTKIALPKPAAGYDNVIVASALHQSRDLFFYIAQNTRGDLFK
ISRDSETQHWSVLYFGTMSCVCTSLTILKSAHMVCLSEQGDSHMMFFESLGDDDAPENVY
DVISPSPYLTVTQTLFELKPVFDSVVGVNTTSSDHVGPVPNVLSLISATRGGLKLISHAL
KPSIIVASPLPEPPSKLWTMRDGAGSDKYIVLSYANATLVLEIGDSVVETTSSGLTLDKP
TLHCGSVGSSYVQVMTDGMNVIPMSREGSSESLPATKWTAPSGQVICASSSSHQVVLGLT
SSLFYFEDTPGSELSAYDGAYELSSPPTAVAVAPVPAGRVRSPFVAVATDDETVRIVSVD
PESMFETVAVQGLMATASSLALLSVGQVLYLHMGLANGVYVRVELDPLTGEIVGSWSKFV
GLGRLSVVPVTCGGEESILVSSRGVKTCLGHVNATSDTWVPTGGNSAPFFALDAISGEPL
DLAHSFHTQDCPHGVIGVAGSTLKIFTVNTAQKWTENEVKLEGTAKRLIQHDATTLTITQ
NPDRLVSVDNGAVGITKDLGGPPTSICEVMFGDGKRYFAVGGSRDGSPGTSGTSGYISIF
SSSSLGHVHTTEVEAPPLALCAYNGLLVAGIGSQVRLYALGLKQVLRKAQIELSKRVTCL
AHFAGSNRVAVGDIRQSVTVCVVLEEDSGHVIYPLVCDKISRQVTCLFFVDYETVALGDR
FGGFTMLRIPSEASKLADEDHNAVHLRQLEPTLNGPAHFRFDHVASFHIEDVPVAIHMYN
DYLVVCGLLGTVSAFVPVVSPKQSRDLKTIEKFVCASDPGLMGRDHGRFRGYYVPVKEVV
DGDMLREVLVMDEKRREEVGEKTGLGVEGAVGRVVNVMKGV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccactcgactctgcggtccagcagccccaaatccgctatctgtgggcgcttc
agtggcaaatcgcaacaagttatcacccttagctccacaggaaacgccctctatttgtac
tcccacgatggtgacaccggcactgtcaccctgatacatactcatttgactcactgccag
gtgagagaaatccgggcgttccgcctcccgggcctcaagaaggactacgtgatcgcttcc
tcggactcgggtgtcatttccgtgctcgaattccgccacaatcgctttgtgtcgctccac
aaagaggcgtacggacgaagtggcatccggagagttgtgccgggcgaatttctcgctgtg
gaccccaagggacgagcctgcatgctcgccagtgtcgaaaaaagcaaactggtctacgtc
ctaaaccgccagggtgccgatatcgtcatttcgtcgcccctggaggcccataccagctgt
gtcacctactttgtcgtggcatgtgacgtggcctacgaaaacccagtgtttgcggccatc
gaaacaccagttggagaaacgtcgccaggcaaacaactcgtcttctacgaactggacctg
ggcctcaaccacgtcatcagaaaagctcccgtcgacatccctaactcgacgagccatgtg
accgccgtccctggaggcaccgacggacccggcggcgtgctcgtcttctccaccaacgcc
attgtccatcacgtggccggagccgccgggggcgcatcaaccggagccgcgggcagcaca
aaaatcgccctcccaaaacccgcagccggatacgacaatgtcatcgtcgcatccgcattg
catcaatctcgtgatctctttttctacattgcgcaaaacacccgcggcgatctgttcaag
atctcacgtgactcggaaacccaacactggtccgttctctactttggcaccatgtcttgc
gtatgcacttcgcttacgattctcaagtcggcccacatggtgtgtctcagcgaacagggg
gacagtcacatgatgtttttcgagtctctcggcgatgacgatgcgccggaaaacgtctac
gacgtcatttcgccctcgccgtacctgactgtaactcagaccttgtttgagttgaagcca
gttttcgacagtgtggttggcgtcaatactacttcgtcggatcacgtgggcccagtcccc
aacgttctgtcgcttatatcagctacacgcggggggctgaaactgataagtcatgctctc
aagccctccatcattgttgcctctcctcttccggagccgccctccaagctctggaccatg
cgtgacggagccggttcggacaagtacattgttttgtcttacgccaacgcgacgttggtg
ctggaaatcggcgactcggtagtcgaaactaccagttcgggactcaccttggacaaacct
acccttcattgtggaagtgtaggttccagttatgttcaggttatgaccgacggaatgaac
gtgattcctatgtcacgtgaaggaagttcggaatctcttcccgccacaaaatggactgcc
ccctctggtcaggtgatttgtgcctccagctcttcccatcaagtggtgctcggactcacc
tccagcctcttctactttgaagatacacctggaagtgaactttcggcctacgatggggct
tacgagctgtcgagcccgccaacggcagtcgctgtagctcccgttcccgctggaagggtg
cgatcgccgttcgtggccgtggccaccgacgacgaaacggtccgaattgtgtctgtggac
cccgagtccatgtttgaaactgtggctgttcagggtctgatggcgaccgcgtcatcgctg
gcgctgctgtcagtcggacaggtgctctatctccacatgggtctcgccaacggcgtctat
gtgcgtgtagagctggatccgttgacaggagaaattgtcggctcctggtcaaagtttgtg
ggtctgggacgactgtcagttgttccggtcacgtgcggcggtgaggagtccattctggta
tcatcacgtggcgtcaaaacttgtcttggtcacgtgaacgccacttccgacacgtgggtc
cccaccggcggcaattccgcgccgtttttcgccctcgacgccatttccggcgagcctctg
gatctggcgcattcgttccacacacaagattgtccccacggcgtcattggagttgcggga
agcacgctcaagattttcacggtcaacacggcgcagaaatggaccgaaaatgaggtgaaa
ctggagggaaccgcaaaacggctgattcagcacgatgcaacaactctgacgattacgcag
aatcccgaccgcttggtttccgtcgacaacggcgccgttggaatcaccaaagacttgggg
ggacccccaacctccatctgtgaggtcatgtttggtgacggaaaacggtactttgcggtt
ggcggatcacgtgacggttcccccggaacttctggaacttccgggtacatttccatcttt
tcctcctcgtccctgggtcacgtgcacaccaccgaggtggaagcgcctcccctcgctctc
tgtgcctacaacggactactcgtcgctggtatcggctcccaggtgagactgtatgcgctg
ggactgaaacaagtgctgcggaaggcgcagattgagctgagtaaacgggtcacatgtctg
gcccattttgccgggtcgaaccgggtggcggtcggggacattcgccagtcggtcacggtg
tgtgtggtgctcgaggaagacagcggtcacgtcatctaccctcttgtgtgcgacaagatt
tctcggcaggtcacgtgtctttttttcgtggactatgagactgttgctctcggagacaga
tttggcgggtttacaatgttgcgaattccgtcggaggcgtcgaaactggcggacgaagat
cacaacgcggtgcatttgcggcaactggagccgactctcaatggcccggcgcacttccgg
ttcgaccacgtggcgtcgttccatatcgaggacgtgcccgtggccattcacatgtacaat
gattatctggtggtgtgcggtctgttgggcactgtgtcggcgtttgtgccggttgtgtca
cccaagcagtcccgtgatctgaagactattgagaagtttgtctgtgcgagcgatcccggg
ttgatggggcgggatcatgggcggttccgggggtactatgtgcctgtcaaggaggtggtt
gatggagatatgttgagggaggtgttggtgatggatgagaagaggcgggaagaggtgggg
gagaagacagggttgggggttgagggggctgttggtcgggttgtaaatgtgatgaagggc
gtgtag
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