Yarrowia lipolytica: 2910721
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Entry
2910721 CDS
T01033
Symbol
YALI2_D00220g
Name
(RefSeq) Exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2910721 (YALI2_D00220g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2910721 (YALI2_D00220g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
2910721 (YALI2_D00220g)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
2910721 (YALI2_D00220g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
2910721
NCBI-ProteinID:
XP_502680
UniProt:
A0A1H6Q8Y5
Q6C9I2
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All DBs
Position
D:1455653..1456591
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AA seq
312 aa
AA seq
DB search
MPFSPAEIDYLRKSLQATPTIRPDAREPNQFRPVDAAQNFLPATNGSARIRTSDGGECIV
GVKAKVVKNSSVDELIAVEVDIDDIRDDSPLPKLLSAVLQTLILSSIDTNRLRLTRSNYA
FKLHIDALVLSHTSFPLNLVSLAIFLALKCTRLPLLVSSANDEEHEEVPVFSDDWEESLA
LCGGEILANNSGSEAISWTPPLVFSLAVVGNNILVDPTHEEESVSDLGLIMGWCNGQVCA
PLRIIDLASAGGNVSPEQLSQQQSMLEQGIDLNMKGTSRKLIMKAYSLLTNTAPEVVAAL
DATADEEDGALF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctcgccagcagaaatcgactatctccgcaaatcgctccaggccacgcccacg
atccgaccagacgcccgagagcccaaccaattccggccggtggatgcagcgcagaacttt
ttgccagcaacaaacggatcagcccgaataagaacgtcggacggaggcgaatgcattgtg
ggagtcaaggccaaggtggtgaagaactcgtccgtggacgaactgattgccgtggaggtg
gatattgacgatatcagagatgacagtcccttgcccaagctgctgtctgccgtactgcag
acgctcattctttccagcattgacacaaaccggcttcgtctgacccggtccaattatgct
ttcaagctacatattgacgcgttggtgctgtcgcacacctcgtttcctctgaacttggtg
tctctggccattttcctggctctcaaatgcacacgtcttcctcttctggtgtcctcagcc
aatgacgaggagcacgaggaggtccctgtattttccgacgactgggaggagtctctggcg
ctctgtggaggcgagattctggccaacaactccggatcggaggccatttcgtggaccccg
cctctggtgttttctctggcagtggtagggaacaacattctcgtcgatcccacccacgaa
gaggagtctgtgtctgaccttggcctcatcatgggctggtgcaacggccaggtctgcgct
cctctacgaatcatcgatcttgcatctgctggaggcaacgtgtctcccgagcagcttagc
cagcaacagagcatgctggagcagggcatcgacctgaacatgaagggtacttcgcgaaag
ctcatcatgaaggcctactctctgcttaccaacaccgctcccgaggttgttgctgcgctc
gacgccactgctgacgaggaggatggtgctttgttctaa
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