Yarrowia lipolytica: 2911027
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Entry
2911027 CDS
T01033
Symbol
YALI2_D00105g
Name
(RefSeq) Exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2911027 (YALI2_D00105g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2911027 (YALI2_D00105g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
2911027 (YALI2_D00105g)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
2911027 (YALI2_D00105g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
2911027
NCBI-ProteinID:
XP_502446
UniProt:
Q6CA66
A0A1D8NDA4
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Position
D:796167..797168
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AA seq
333 aa
AA seq
DB search
MAILTIQKATPREEEDVEMVYSDADSDAEEQMVMSDDENEDMDDNAQAANVAAGLVTPGK
LITEDPIWMRGHGTYSVGNKTFSSTAGVVTKTNKLLSVVPLRGRYQPQIGDHVVGRIVDV
GVKRWRVDIGAKQLAVLQLGSVNLPGGILRRKQESDELQMRGFLKEGDLINTEVQSLYQD
GSAALHTRSLRYGKLRNGVLITVPSALIVRAKSHVHQLPGGVDTVVGVNGWIWLCMAWAN
SHLTRENTTSITRLEEEASLTETYSDKNEDIPRSVRENIARYANCFKALAANEVGITEDR
VIAAYEASLVYPSAGDLIDKEAKEIIAAKAIAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggccatcttgacgattcaaaaggcgactccccgagaggaggaagacgtggaaatggtg
tattcggacgccgactcggacgccgaggagcagatggtcatgtctgacgacgaaaacgaa
gatatggacgacaatgctcaggcagcaaacgtggctgcgggtctggtgacgcccggcaag
ctgattacagaggaccccatttggatgcgaggccacggtacctactcggtgggcaacaag
accttctcatccactgctggagtggtgaccaagaccaacaagctgctgagtgtggtaccg
ctgcgaggccgataccaaccccagatcggagaccacgtggtgggacggattgtggacgtg
ggagtgaagcgatggcgggtcgacattggcgccaagcagctggctgtgcttcagctgggc
tccgttaacctgcccggaggtattttgcgtcgaaagcaggagtccgacgagctgcagatg
cgaggattcctcaaggaaggagatctcatcaacacagaggttcagtcgctgtaccaggac
ggatctgctgctctgcatacccgttcgttgcggtacggtaaactgcgtaacggagttctc
atcactgtgcccagcgctctgattgtgcgtgcaaagagccatgttcaccaactgcctggc
ggagtggacactgtggtgggagtcaatggctggatctggctatgtatggcctgggccaat
tctcacctgactcgagagaacaccacaagtatcactcgactggaagaagaggcctctttg
actgagacatacagtgacaagaacgaggacattccccggtctgtcagagagaacattgcg
cggtacgccaactgtttcaaggctctggctgctaatgaggttggtatcaccgaagatcga
gtcattgctgcctacgaagccagtttggtgtaccctagtgctggagacttgattgataag
gaggcaaaggagattattgctgccaaggctattgctgcgtga
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