Yarrowia lipolytica: 2911077
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Entry
2911077 CDS
T01033
Symbol
YALI2_D00695g
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yli03009
]
2911077 (YALI2_D00695g)
Ribosome biogenesis [BR:
yli03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
2911077 (YALI2_D00695g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
2911077
NCBI-ProteinID:
XP_503151
UniProt:
Q6C861
A0A1D8NFR4
LinkDB
All DBs
Position
D:complement(join(2902595..2909891,2909947..2910230))
Genome browser
AA seq
2526 aa
AA seq
DB search
MQFKSFRERLDAIKIDPLKRQKKKLSRDTDTSHFIACYTTHVELNLSTSFTRFMEKCGKY
AVSLPMVLFHKEEIFDGLEECLEDGNEHSVEALLDLLTNFVRDLGEEFEPYFPRTLALLI
NLTYHFNLEVVEHTFNAMVYIFKYLARLLTSNLVPLYDSVSVLLSRGDEDVQMIENGEED
EEETPEEDSDDEEDDKPKPKKIRPFVRRFASETLAFLIRKCSQDGLDVIVPHVMSTLEGS
SRDYVSAVSAMFAASIKHTKGALHSKTDLILQVLFACAACDDNTITEADRVHVTMISETL
AVVLEHIEDPVMGQAVFDTFFQYAQGNGNYDTVTYLTTITAIRKGSRVPDWARVFQEAKA
FCSTLSDKAIVEFALLVVSLIQNGAQSNVLANHTSLLTTLSSKSREQYFVAFQILAKVQS
QRFTDICVKYIPQLISMFSDDLSQIALFVDSLEKIKCLDACKVLKKEIVAFGKKNMSTET
VFNLYWRIRMFTKLSNVDMKKEMTEFAIELLPKLSADDVYTGALYGVTLSLIGSLGDDKQ
LVERALGRLEHFSQIEGYITGLLAICDSSTKLDDSSLVLLTQNLTSANTHVRDVTLSLIS
KLSRGQNALVNECKVISSIPFDYTTLRSLVQRIEKLGETFSLSGSDTIADSAVPHFLFGL
LTVHFTPAHEAAIKALKNVAERFPELVWKLSYNVLQARDLVKVDDDWVPEPRHVLDSPFT
DSMSPDYNLNGLFETYNELVSRDSNGALFEDFSESAFPAEEPFYLRNNVLKVLKAVPRVS
ENHVMELVPYLLWTEGVSRDKQAVESSEYGLADSWTLKDKIVLLDIFALFHNTKNCPRAE
EIYQRYLLLLTNKMNSVQKAALQCILSWKNKVVRKYKDNLFNLLEDSQFKDEMLSFLKPS
KDRVLHEDDEHVIFPLALRILYGRSRVVSKSGPRYGKRFAVLSTLLALPEKYTRMFVSLA
IDQLEIPKDFDILGDDHVIEPNPRDLVTLSGNCETRTAASQIFFLELAMDLGKQIGAKLH
SSMDILLNSVLYCMHYSCLIPDNTSARRMSRYGFKVLTQLFLKIKDFEWQPYLTPIYYPC
IESKLPTFVAGNTKRPSALLQITFLWGSRAQAFPLFVFEEVALLKQVVALLKVSDLPDST
IKDCILLWSSIFAIEDQVNAGEFDHVVDSTIPLLLPRIPALLDEHRRNFDVVTTIAKLLV
ITCQKGYARDQKVKSDLIAVVTDLVVNNKVSWSIQVSLLNALTELVPVTTLAKEHVTEMY
LNLSTLFQTIKLQSARDALVNAFCAVCTKLGGVDRTAELVSQLNSVGKRLNEPDWDTRMA
AYNDITQREFSSFSAMEWTPLISNMLHFIRLDDLPIRQNSTLVLMRFFESIQESQPDKIE
LIDDIVMPELVVGMREPQFNIRIEFVQVLENLVKLSERHLFEPLNDLVTLLAPNKSADAN
FFYNVMHVQILRRQKAVQYLNYFVRKGAISSDNIANLLLPLIEHYGKRNNQETQNLAHMT
YKCIGSMTRFVTWEQYVKISKRFVGYLRKGCQSLKQASRMLAALGVAFTEDDSREEEDEE
EEEENTEEIAEEVEDEAMSDDRENYSDAVYTVPRAPKLISMDTSLFGTTSTPEERSAFLL
ENVIPPIRKTLRAHSNEQLTDRIPLGIPVVRFIVALPPAQVMTVLPGTLTTLCQVMRAKQ
QELRDEMRKLLGQIAEILGARYLLFLLRELKSALRRGAHLHILGYTVWYILSTMTLEHAD
LDPVAALCSEIIMEDVFGVTGTDKDEEDYRSAMKEVKTQRSYDTAAILASNVSLESFSKL
IDPVKTILLHKRLTLGVSEKVETVLTHLSRGLKRNAASESQSVLIMCFEVWKLTQTIESK
YNEEEEAKSQKIVALDDNESDYIVNLDAKSHVTKLRDGMHIANLNLLVAFTFDTLKSVLS
NNPELRTANNLYGFLQPLTQSLSNTHENVQVGALRVLSMICDLDFPDMDSWTQKWGTETL
KIIANSSDTKTQLVQNAFRLLTKLFECSESFEVKESALGNILTRILPDLVESQGQNITFN
LVNAVLGRQIVISEVYDVMKQIANIMITHQQSETRDHCRELYFTFLTTYPQSRDRLNAEF
QFLIHNLDYPFDSGRQSVLEMIHRLLTEVSDALLKQTITSFFVALTLVLYNDDSSTCREM
ASTIIKILLQKSSQGVEQKFVQDLIYSWIDSDLSSDLLKVALQVVGFYVESEPSDKDKIL
NKAEKQVIAIIAAQSSLPWDLVYFAMQLWGRMCSHKQVQFTQTKYSTMWDGVVECLLYPH
SWVRLSASRAVGLLFDAFKARDSDSGLVFSNRQLQTVAYRLVRQLSTPNASDKLCTQAVK
NLTYIVQEWENSSYLYQKSDSEKDEDDATETGSSLATDWLLGRVSGIIRTTVKGKDKLHA
KRACVRFLAVLVSLLSESRVMEISEHVIYALFTTMDQHEAAVDSTLRELASETLEMLKAK
IGVSEYLGKHAQVSQMVSQKRHERKHEMAMLAMSDPAAYSEQKMKKNKKKRKLEKEKKQA
EKRRKL
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaaatcgttccgagaacgtcttgatgccatcaagatcgatccgctgaaacgg
cagaagaaaaagctgtcgcgggacacggacacgtcgcatttcattgcatgttacacgacc
catgttgagctgaacttgtccaccagcttcactcgttttatggaaaaatgtggaaagtac
gccgtgtcgctgcccatggtgctgttccacaaggaggagattttcgatggtttggaggag
tgtctggaggatggaaatgaacacagtgtggaggcgctgctagatctactcaccaacttt
gtccgcgacctgggcgaggagttcgagccatacttcccccgaactctcgcacttctcatc
aatctcacctaccacttcaatctcgaggtggtcgagcacactttcaacgcaatggtgtac
attttcaagtacctggctcgtctattgactagcaacctggtgcccctgtacgacagcgtc
agtgtacttttgtcccgaggagatgaagatgtgcagatgattgagaacggagaagaagac
gaggaggagaccccggaggaagactctgacgacgaggaggatgacaagcccaagcctaag
aaaatcagaccgtttgtgcgaagatttgcctcggaaacactggcctttctgatcagaaag
tgctcccaagacggtctggacgtgatcgtgccgcacgtgatgagcacgctggagggctcg
tcacgagattacgtctctgccgtctccgccatgtttgctgcgtctatcaaacacaccaag
ggagctcttcattcaaagacggacttgattcttcaagtgttatttgcatgtgcggcttgt
gacgacaacacaatcaccgaggccgaccgagtacacgtgaccatgatttcagagactttg
gccgttgtgctggagcatattgaggaccctgtcatgggccaggccgtgtttgataccttt
ttccagtatgcccaaggcaacggtaactacgatactgtgacctatctgactactataacc
gccatccgaaagggttcccgagttcctgattgggctcgagtcttccaggaggccaaggct
ttctgctccactctctccgacaaggccattgtcgagttcgcgctcctggtggtctcgctc
atccagaacggcgcccagagcaatgtgctggccaaccatacgtccttgctcaccactctg
tcgtccaaatcacgtgagcaatactttgtggcgttccaaattcttgccaaggtccagagt
caacggttcaccgatatctgtgtcaagtacattcctcagttgatcagcatgttctctgat
gatctttcgcagattgcactctttgtcgacagtctggagaagatcaagtgtctggatgcc
tgcaaggttctgaagaaggagattgtagcgtttggcaagaagaacatgtccactgaaaca
gtcttcaacctctattggcgaatcagaatgttcaccaagctttctaatgtcgatatgaag
aaggagatgaccgagtttgccattgagctactccccaagctttccgctgacgacgtgtat
actggagctctttacggagtcactctgagtctgattgggtcattgggagacgataagcag
ctggtggaacgagccctgggccgcctggaacacttttcacaaatcgaaggctacattacc
ggtctgctggccatttgtgactcttcaaccaagctggatgactcgtcactggtgctgctg
acccagaacctgacctccgcaaacacccacgtgcgggacgtgacgctgagcctcatttcg
aagctgtcacgtggccagaacgcgctcgtcaatgagtgcaaggtcatttcatccattccg
tttgattataccacgttgcggtctcttgttcagcgaatcgagaagctcggagaaaccttc
tccctgtctgggtcagatacgattgctgattcagcagtgcctcatttcctgtttggactt
cttactgttcattttacgccagctcacgaggctgccatcaaggccctcaagaatgttgcc
gaacgatttccggagctggtgtggaagttgtcctacaacgttttgcaggcacgtgacctg
gtcaaggttgatgacgactgggtgcccgagccacgtcatgttctggacagccccttcacc
gactccatgtctcccgactataacttgaatggtttgtttgagacgtacaatgagcttgtt
tctcgcgatagcaacggagctctgtttgaggacttttccgagtcggctttccctgctgag
gagcccttttacctgcgaaacaatgtgctgaaggtgctcaaggctgttcctcgggtatct
gagaaccatgtgatggagctggttccctatcttctttggactgagggtgtttctcgagat
aagcaggctgttgagtcttccgagtatggacttgccgactcgtggaccctcaaggacaag
attgtgttgctggacatttttgctctgtttcataacaccaagaactgtcctcgagccgag
gaaatttatcagagatacctgctgcttctgaccaacaaaatgaactctgttcagaaggca
gctcttcagtgcatcctatcctggaagaacaaggtggttcgcaagtacaaggacaatctg
ttcaacttgctggaggactcgcaattcaaggacgagatgctgagcttcctcaagccctca
aaggaccgagttttgcatgaagacgacgagcatgtcatcttccctctggcgctccggatt
ctctacggacgatctcgagtggtcagcaagagtggaccgcggtacggaaagcggttcgcg
gtgctttccactcttctggctctacccgaaaagtacactcgcatgtttgtttctctggca
atcgaccagctggagattcccaaggactttgacattctcggtgatgaccacgtgatcgag
cccaatcctcgcgacctggtgaccctgtcgggcaactgcgagactcgaactgcggcgtct
cagatcttctttctggagctggccatggatctgggtaaacagattggagccaagttacat
tcgtccatggacattctgctcaactcggtgctgtattgtatgcattattcgtgtctgatt
ccagacaacacctcagctcgtcgaatgtctcggtacggcttcaaggtgctgactcagctc
ttcctcaagataaaggactttgaatggcagccctacctgaccccgatctactacccttgt
atagaatctaagctgccgacttttgttgctggaaacaccaagcgacccagtgctctgctc
cagatcacgtttctgtggggatcacgtgcgcaggcctttcccctgtttgtgtttgaggag
gtggctttgctgaagcaggtggtggctctgttgaaggtgtctgatctgcccgactcgacc
atcaaggactgcattctgctgtggtcttcgattttcgccattgaggatcaagtgaatgct
ggcgagtttgatcacgtggtcgactcgacgattcctctgttgttgccccgcattcccgcc
ctgctggacgagcacaggcgcaactttgacgtcgtgaccaccattgcaaagctgctggtg
atcacgtgtcagaagggctatgcacgtgatcaaaaggtcaagagcgatctgattgctgtt
gtgaccgatctggtggtgaacaacaaggtatcgtggtccattcaggtgtctcttttgaac
gctctcaccgagctggttccggtgaccaccctcgccaaggagcacgtgactgaaatgtat
ctgaacctgtccactcttttccagaccatcaagttgcagagtgcacgtgacgcgctggtg
aacgccttttgtgctgtctgcaccaagcttggaggtgtcgatcgcacggcggaacttgtc
agccagcttaactcggttggcaagcggcttaatgagcccgactgggacactcgaatggcc
gcctacaacgatattactcagcgggagttctcgtctttctctgccatggagtggactcct
ctaattagtaacatgttgcatttcatccgtcttgacgatctgccgatccgacagaactcc
actctggtgctgatgcggttcttcgagtcaattcaagagtctcagcccgacaagattgag
ctcatcgacgacattgtcatgcccgaactggtggtgggaatgcgagagccgcagttcaac
attcgaatcgagtttgttcaggttcttgagaacctcgtcaagttgtctgagcgtcatttg
ttcgagcccctgaacgacctcgtcactcttttggctcccaacaagtccgctgatgccaac
tttttctacaacgtgatgcatgtgcagattctccgacgacaaaaggcggtgcagtatctc
aactactttgtcagaaagggggctatttcttcagacaacattgccaaccttctgttgcct
ctgattgagcattacggaaagagaaacaaccaggagacgcagaacttagcccatatgacc
tacaagtgcattggttccatgacccggtttgtcacctgggagcagtacgtcaagatcagc
aagcggttcgtgggctacctccgaaagggctgccagagcctgaagcaggcctccagaatg
ctagctgctcttggtgtggccttcaccgaggacgactcccgcgaggaggaggacgaagag
gaagaggaggaaaacaccgaggaaattgctgaagaggtcgaagacgaggccatgtctgat
gaccgtgagaactactcagatgcagtctacactgttccacgagctcccaaactcatctcc
atggacacgtctctgtttggaaccacctctacccctgaagagagatccgctttcctgctg
gagaacgtgattcctcccattcgaaagactcttcgtgcccactccaatgagcagctcacc
gaccgaatccctctcggtattcccgtcgtgcggttcattgttgctctgcctcctgcccag
gtcatgaccgtgctgcctggtaccctaaccactctctgtcaggttatgagagccaagcag
caggagctccgagacgagatgcgcaagcttctgggccagattgccgaaattctgggggcc
aggtacctgctcttcctactgcgagaactcaagtctgcgctccgacgaggagcccatctg
catattctgggctacactgtctggtacattttgtccaccatgactctggagcacgccgat
ctcgatcctgtggctgctctgtgttctgagatcatcatggaggacgtctttggagtcacc
ggtaccgataaggacgaagaggactaccgaagtgccatgaaggaggtcaagacccagcgg
tcctacgatactgccgccattctggcctccaacgtgtctctggagtcgttctccaagctt
attgacccggtaaagacgatcctgctgcataaacgtctgacccttggagtcagtgaaaag
gtggagaccgttctgacccacctgtctcgaggtctcaagcgaaacgcggcctccgaatcg
cagtctgtgttgatcatgtgcttcgaagtgtggaaactcacccagacaattgagagcaag
tacaacgaggaggaggaggcaaagagccaaaagattgtggctctggacgacaacgaaagc
gattacatcgtgaacctcgacgccaaaagtcacgtgactaagctccgggacggcatgcac
attgccaacctgaatctgcttgtggccttcactttcgacactctcaagagtgttttgagc
aacaatcccgagctccgaactgccaacaacctgtatggcttcctacagcctctcacacag
tctctttcaaacacccatgagaatgttcaagttggagctctgcgagtcttgtcaatgatt
tgtgacttggatttccctgacatggactcatggactcaaaagtggggcactgagacgctc
aagatcattgccaactcgtccgacaccaagacgcagctggttcagaacgccttcagactg
ctgaccaaattgtttgaatgttctgagtcgtttgaagtcaaggagagtgctctgggcaac
attctgacccggattctgcctgacctggtcgagtcgcagggccagaacatcaccttcaac
cttgtcaatgccgttctgggccgtcagattgtcatttccgaggtgtacgatgtcatgaaa
cagattgccaacattatgatcacccatcagcagtctgagaccagagaccattgtcgagag
ctatactttacgttcctgaccacttaccctcagtctcgtgaccgtctcaacgctgagttc
cagtttctcattcacaacttggattatccgtttgattctggccggcagtctgttctggag
atgatccaccgtcttttgaccgaggttagtgacgcgctgctcaagcagaccatcacctcg
ttcttcgtggctctcacccttgttctctataacgacgactcctccacttgtcgagagatg
gcctccaccatcatcaagattctgctgcaaaagtcgtcgcagggtgtcgagcaaaagttt
gtccaagatctcatctactcttggatcgactccgatctgtcttctgatctgctcaaggta
gctctccaagtggtgggtttctatgtggagtctgagccctctgacaaggacaagatcctc
aacaaggccgagaaacaagtgattgccatcattgcggcacaatcgtctcttccttgggac
cttgtatactttgcgatgcagctgtggggtcgcatgtgctcccacaaacaggtgcagttc
acccagaccaagtactcgaccatgtgggacggggttgtggagtgtcttttgtatccccat
tcctgggttcgtctgagcgcatctcgggccgtggggctcctgtttgatgctttcaaggcg
cgtgacagcgactcgggactggtgttctccaacagacagctccagacggtggcttaccga
cttgttcgccagctgtcgacccctaatgcctccgacaagctgtgtactcaggcggtcaaa
aacctgacatacattgtgcaggagtgggagaattcgtcgtacctataccagaagtccgac
tctgagaaggacgaggatgacgctaccgagaccggctcgtctctggccaccgactggctt
ctgggccgagtgtctggtatcattcgaaccaccgtcaagggcaaggacaagctgcatgcc
aagcgcgcatgtgttcgtttcctagcggtattggtgtctcttctgagtgaatctagggtg
atggagatttctgagcacgtcatctacgcgctgttcaccaccatggaccagcacgaggct
gccgtggattctactcttcgagagctggcgtcggagactctggaaatgctcaaggccaag
attggcgtctctgagtaccttggaaagcacgcccaggtgtcgcagatggtgtcgcaaaaa
cgtcatgagcgaaagcatgagatggcgatgcttgctatgtccgatcctgccgcctactct
gagcagaagatgaagaagaacaagaagaagcgaaagcttgagaaagagaagaagcaggcc
gaaaagcgtcgaaagctttag
DBGET
integrated database retrieval system
