Yarrowia lipolytica: 2911175
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Entry
2911175 CDS
T01033
Symbol
YALI2_D00600g
Name
(RefSeq) Nucleoporin
KO
K18725
nucleoporin POM152
Organism
yli
Yarrowia lipolytica
Pathway
yli03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2911175 (YALI2_D00600g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2911175 (YALI2_D00600g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2911175 (YALI2_D00600g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Ig_NOMO
Motif
Other DBs
NCBI-GeneID:
2911175
NCBI-ProteinID:
XP_503331
UniProt:
Q6C7N1
LinkDB
All DBs
Position
D:complement(3593492..3597355)
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AA seq
1287 aa
AA seq
DB search
MANLNGAGRTTSSPGFSRRFDRRDLLNTSRDGNTAPPINSVRDSTAYPDTRRSSGVAKPI
KTFHATQKPWRQEKITVPPKSEPLIPETYMSAANQRWAAVSLFLLFLASKITYLLTPVSP
GEQFGLLFKFFALDLVLLWTLPLFRIPWLTFGPVVTTLLSFAFLGFDMGIVYYREGLVFA
LGLGSAVWRTVNDKELSFSGLKIKVASLQDASSHLIGEHIVQILPKSTALINPMDQPFCL
TGDSAQTITIPVRLNATGLSSLELKYIDFDNLEEKSFNFTKNQLVKFRGRSDYVRSLDYK
LKDADKKKLFYVELPVDKTGLYRLGKVVDDSNNAVRTYMKDVIVGACPGAKLRQSNDSLH
LGSNRCIGGTEQPNLVVTGVPPLRIKYSKEVEGQSSVFSVQSVQPRHFVSPIASGDVNRY
VWKSGADLSWAVPHEVPIHLDARLSQTGKWVYTVDEVEDGLGNIINYTAIAKGKDEEWRT
RRQLTHEFFVHPRPQVSFRTCSAEKRARLAGDHVSLDLKVQAEEDLVLTIKHTDEYGKSE
VFNATVPRGQQSIPVSKAGIYELEAVQGKYCAGDIVESSECHVYVPPKPSLSVEFTDIQD
QCAGPVGATAELAFTGQPPFHAVYRTVRDGQVIDTQKITTHRLRHQLKFKPQSAGTYTYE
IVSFSDAIYKQPQDTSFTKKQTIRVLAGALFDKSIARQRFVCSGESVDLPVTLRGVPPFT
LEYEIVHGSSRRVPHTIKDIKDQKHVISTSGLSQGGQYTISLVAVTDSHGCRSLLDEQDI
RVEVRRQRPSAGFLPISGDYDVAVPQGSPVKLPVTLNGDGPWNLEYEYIEGEKRERHRVQ
VGDANGFFTVSRPGHYRLVSVRDAHCPGEITHDAIFSLTWIARPAVKIVKAGNTEAKDGV
LSRAPICEGDQDSVEIALEGSPPFTVLYRVTGPGGKTKDHEIQVATPFANVRVETNAPGE
YEYFFMGVLDSNYYDRKWLADVGAGDDVAFSDSRLRQLVKARPTAKFVDKGRVYRACQGI
ADSADGIPIKLTGEAPFSLTVSIRVDSSGHTEKVTYNNVGADFELKSQLYSRLGLGKHTV
QIYQVVDARGCRQSNFGADQRVTVHVADTPTITAVEERTDFCVGERISYSLTGIPPFDVT
YDFNGNVRESTSGTLFRRLAAEPGNLTIKAISDTASSCRIELEGAKQLPKRIHPIPTARV
EEGTSLIFDENGAEKAEIHFHLQGTPPFQLQYTRSEMISGKEVVVETHTVGSIKTHTYTI
WTGLQGIYRPIVVSDFYCTTAGERASH
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctcaatggcgccggaaggaccacgtccagccccgggtttagccgacggttc
gacaggcgcgacctgcttaacaccagccgtgatggcaacacagctccacctatcaacagt
gtgcgggactcgacagcctacccagacactcgacggagttcaggagtggccaagcccatc
aagacatttcatgcgacacaaaagccgtggcgtcaagagaaaatcacggtgccgcccaaa
agcgagcccttaatacccgaaacatacatgagtgcagctaaccagcgatgggcagccgtg
tcgctgtttctgctgtttctggcgtccaaaatcacatatctgctgacgccggtgtcgcca
ggagagcaatttggactgctattcaaattctttgcattggatctagtcctgctgtggact
cttccacttttccggatcccctggctcacgtttggccccgtggtgaccactctgctgtcc
tttgcattcctgggattcgacatgggcattgtctactaccgagagggtcttgtttttgcg
ctgggactcggttcggccgtttggagaacggtcaatgacaaggagctgtccttttctggt
ctcaagatcaaggtggcgtctcttcaggatgcctctagtcatctgattggagaacacatt
gtccagattctgcccaagagcactgcgctgatcaatcccatggatcagcctttttgtctc
actggtgacagtgctcagaccattacaattcctgtgcgtctcaacgccaccggtctttct
tctctcgaactcaagtacattgatttcgacaacctcgaggaaaagtcgttcaatttcaca
aagaaccagctcgttaagttccgaggccggtccgactacgtgcggtctctggactacaag
ttgaaggacgccgataagaagaagttgttctacgtcgagcttccggttgacaagaccggc
ctgtatcgacttggaaaagtagttgatgactcaaacaatgctgttcgaacctacatgaag
gacgtgatcgttggagcttgtccgggcgccaagttacgacaaagcaacgactctctacat
ttgggatccaacagatgtattggcggcactgagcagcctaaccttgtggttaccggagta
cctcctcttcgaatcaagtactcaaaggaggtggagggtcagtcctctgtgttttccgtg
cagtccgttcagccccgtcatttcgtctctcccatagccagtggcgatgtcaacagatat
gtgtggaaaagcggagctgatctcagctgggctgttccccatgaagtgcccatccatctc
gacgccagactcagccagaccggaaagtgggtctacacagtggatgaggtggaagatgga
ctgggaaatatcatcaactacactgctattgccaagggcaaggacgaggagtggcgaacc
cgacgccagctcacccacgagttctttgtccatcctcgaccccaggtttcattccgaacc
tgttctgctgaaaaacgagcccgtctggccggtgaccatgtatcactcgacctcaaggtc
caggccgaggaagatctggttctcaccatcaaacacacagacgagtacggcaagtccgaa
gtatttaacgccacggttcctcgaggccagcagtcaattccagtctccaaggccggtatc
tacgagctggaggctgtccaaggcaagtactgtgctggtgatatcgtcgagtcatccgag
tgccacgtttacgtgcctcccaagccgtctctttccgtcgagttcaccgatattcaggac
caatgtgctggccctgtgggagctactgccgagctggccttcaccggtcagcctcctttc
catgctgtctaccgaaccgtgcgggacggacaagtgattgacacgcagaagatcaccacc
catagactgcgacaccagctcaagttcaagccccagtccgctggtacctacacttatgag
attgtgtcgttcagtgacgccatttacaagcagccccaggacacgtctttcaccaagaaa
cagaccattcgagtgcttgccggtgccttatttgataagagtattgctcggcagcggttt
gtttgctctggcgagtctgtagatctgcctgtcactctacgaggcgtccctccgttcact
ctggagtacgagattgttcacggttcgtctcgacgagttccccacacaatcaaggatatc
aaggaccagaagcacgtgatttccacgtctggtttgtcgcagggaggtcagtacaccatt
tctctagtggccgtcaccgactcccatggatgcagatctctgctggacgagcaggatatc
cgcgttgaggtgcgtcgacagcgtccttcggccggcttcctgcccatttccggcgactac
gacgtggctgtgccccaaggctcccccgtcaagctgcctgttactctcaacggtgatggg
ccatggaatctcgaatacgagtacattgagggagagaagcgagaacgacatagggtgcag
gttggagatgccaacggctttttcactgtttctcggcctggtcactaccgacttgtgtct
gttcgagatgctcattgtcctggagagatcacccatgacgctatcttctctcttacttgg
attgctcgacctgccgtcaagatcgtcaaggctggcaacaccgaggctaaggatggcgtt
ctctctcgagctcctatttgtgagggtgatcaggactctgttgagattgctctcgagggt
tctccgcccttcactgtcctctatcgagtgactggacccggagggaagaccaaggaccat
gagatccaggtggccactccctttgccaacgtgcgagtcgagacaaacgcccccggtgag
tacgagtacttcttcatgggtgtcttggactccaactactacgaccgaaagtggctggct
gatgtcggcgctggagatgatgtggccttctctgactccaggctgcgacagctggtcaag
gctcgacccaccgccaagtttgtggacaagggacgcgtttaccgagcttgtcagggtatt
gctgactctgctgacggcatccccatcaagctgactggcgaggcccccttctctctcact
gtttccattcgagtcgactcttccggacacaccgagaaggtgacctacaacaatgtaggc
gccgactttgagctcaagagccagttgtactcgcgcctgggtctgggtaagcatactgtg
cagatctaccaggtggttgatgctcgaggatgtcgacagtccaactttggagccgaccag
cgggtcaccgtgcacgttgcggacactcctaccattactgctgttgaggagcgaacagac
ttttgtgtgggcgagcgaatctcgtactcgcttactggtattcctccgtttgacgtcacc
tacgatttcaacggcaatgtgcgagagtcgacctctggcactctgttccgacgactggct
gccgagcccggtaaccttacaattaaggccatttctgacactgcttccagttgtcgaatt
gagctggagggagccaagcagctgcccaagcgaatccaccccattcctactgcccgtgtg
gaggagggcacgtcgctcattttcgacgagaatggagctgagaaggctgagatccacttc
cacttgcaaggcacccctcccttccagcttcagtacacccgaagtgagatgatttccggc
aaggaggtggtggtggaaacacacactgtgggcagcatcaagacccacacttacaccatc
tggactggtctgcagggtatctaccggcccattgtggtgtccgacttttactgcaccacc
gccggtgagcgggcctctcattag
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