Yarrowia lipolytica: 2911560
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Entry
2911560 CDS
T01033
Symbol
YALI2_E00312g
Name
(RefSeq) Replication factor A protein 1
KO
K07466
replication factor A1
Organism
yli
Yarrowia lipolytica
Pathway
yli03030
DNA replication
yli03420
Nucleotide excision repair
yli03430
Mismatch repair
yli03440
Homologous recombination
yli03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2911560 (YALI2_E00312g)
03420 Nucleotide excision repair
2911560 (YALI2_E00312g)
03430 Mismatch repair
2911560 (YALI2_E00312g)
03440 Homologous recombination
2911560 (YALI2_E00312g)
03460 Fanconi anemia pathway
2911560 (YALI2_E00312g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yli03000
]
2911560 (YALI2_E00312g)
03032 DNA replication proteins [BR:
yli03032
]
2911560 (YALI2_E00312g)
03400 DNA repair and recombination proteins [BR:
yli03400
]
2911560 (YALI2_E00312g)
Transcription factors [BR:
yli03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
2911560 (YALI2_E00312g)
DNA replication proteins [BR:
yli03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
2911560 (YALI2_E00312g)
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
2911560 (YALI2_E00312g)
MMR (mismatch excision repair)
2911560 (YALI2_E00312g)
DSBR (double strand breaks repair)
HR (homologous recombination)
2911560 (YALI2_E00312g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
CDC24_OB3
DUF4503
Motif
Other DBs
NCBI-GeneID:
2911560
NCBI-ProteinID:
XP_503990
UniProt:
A0A1D8NIJ9
Q6C5S2
LinkDB
All DBs
Position
E:1983812..1985581
Genome browser
AA seq
589 aa
AA seq
DB search
MTFELSTGFFDAVENATSRDELPEKFRAPILQIVRPMSELPGKNRFKVTLFDGEKPGMVF
GDLDNLPQERPGKFDIVKLSNFELVMAKQRGVVYVHQMDFLSHADAALGLDTEEDAELPG
GAAATAPAAATSNPTPAKRMASTNEIPAGVQAQGFPATVMPIERLSPYQNKWAIKVRVTS
KADKKKFSNTKGEGQLFNVTFIDETGEIRATGFNQEVDKFYPMLEEGQVYYVTQCRVSMA
NKKFSNVNNDYELVFGRDTVIIQADEAEAAAIPTANYSFVTLDKLQDVEVGNNVDVLGVV
QNVGPLEDGVAKATGNPYKRRNLMLGDKSGFATRLTFFGEKATSFDEGTVPVGTIIAIKG
ARVGDFNGRNLSTSHSSTIAVEPAIDETYALKGWYASEGKQTSFKQLQTTTTNKPVAATP
IDVATSSYGQSEKPDYYTLQAWVVHVRTGNFAYPACQTPDCNKKVVEHGDEWRCEKCEKN
MDKPLYRYILSINVGDATGSMWLTAFNEPAEVIMGMTADQLTEIQTSQGDDEFEQAVQKV
TGKQYTLRCRSKQEFYNEESKARHQVLTAQALDYLKDIDELIKDLDQYM
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgagctatcgaccggatttttcgacgccgtggagaacgccaccagccgagat
gagctgcctgaaaagtttcgggctccaattctccagattgtgcggcccatgagcgagctg
cccggcaagaacagattcaaggtgactctgtttgacggagaaaagcccggcatggtgttc
ggcgacctggacaacctgccccaagaacgaccgggcaaattcgacattgtcaagctcagc
aactttgagctggtcatggccaaacagcgaggagtcgtctacgtccaccagatggacttc
ttgagccacgccgacgcggctctgggactcgataccgaagaggatgctgagcttcctggt
ggcgctgctgctactgctcctgctgctgccaccagcaaccccacccctgccaagcgaatg
gcttctaccaacgagattcctgctggtgtccaggcccagggattccccgccactgtgatg
cccattgagcgactttcgccttaccagaacaagtgggccatcaaggtccgagtcacttcc
aaggccgacaagaagaagttctccaacaccaagggagagggccagctcttcaatgtcacc
tttatcgacgagacgggcgaaattcgagccaccggcttcaaccaggaggtggataagttc
taccccatgctggaggagggccaggtttactacgtgactcaatgccgagtctccatggct
aacaagaagttctccaacgtgaacaatgactacgagctggtgtttggccgagacacggtt
atcatccaggcggacgaggccgaggccgctgctatccccacagccaattactcgtttgtg
actctcgataagctgcaggatgttgaagttggcaacaatgttgacgttcttggtgtcgtc
cagaacgttggtcccctggaagacggcgtggccaaggctactggcaacccctataagcga
cgaaacctcatgttgggagacaagagtggatttgccacccgtctgactttctttggagag
aaggccacttccttcgacgagggaactgttcctgttggcaccattatcgccatcaagggc
gcccgcgttggcgactttaacggccgaaacctgtccaccagtcacagctccactattgcc
gtggaaccagccatcgacgagacctacgcgctcaagggatggtatgcctctgagggtaag
cagacgagctttaagcagctgcagacaactaccaccaacaagcctgtggccgccacaccc
attgatgtcgccacatccagctacggacagtcagaaaagcccgactactacaccctacag
gcttgggtcgtgcacgttcgaaccggcaactttgcataccctgcttgtcagactccggac
tgtaacaaaaaggtggtcgagcatggtgacgagtggcgatgcgaaaagtgtgaaaagaac
atggataaacctctttacagatacatcctctccatcaacgtgggagatgccacaggaagc
atgtggctgacggcattcaacgagcctgctgaagtgattatgggcatgaccgcagatcaa
ttgaccgagatccagactagccaaggagacgatgagtttgagcaagctgttcagaaggtc
accggcaaacagtacactctgcgatgccgatccaagcaggagttttacaacgaagaatcc
aaggctcgtcaccaggttcttacggcgcaggcgctcgactatctcaaggatattgatgag
ctcatcaaggacctcgaccaatacatgtaa
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