Yarrowia lipolytica: 2911603
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Entry
2911603 CDS
T01033
Symbol
YALI2_E01198g
Name
(RefSeq) Putative WD repeat-containing protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
yli
Yarrowia lipolytica
Pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2911603 (YALI2_E01198g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yli03041
]
2911603 (YALI2_E01198g)
Spliceosome [BR:
yli03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
2911603 (YALI2_E01198g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
PRP4
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
PROPPIN
PAN2_N
Motif
Other DBs
NCBI-GeneID:
2911603
NCBI-ProteinID:
XP_504496
UniProt:
Q6C4B6
A0A1D8NKA4
LinkDB
All DBs
Position
E:complement(3426986..3428344)
Genome browser
AA seq
452 aa
AA seq
DB search
MELVDLESIKTTVDSSSVREEAVAARQLLEKQRRADILKKLHVPTDDKDVRAKLRSLNEP
ITLFAEDKADRRTRLGQLMVDEFDREGLQDEESDSDVSMDDDEFFTPGSEELLDARRQIT
NDSILRARDRLTTQKQQSELSLVETVNLRRDKMAPIEQYQLLGSQFVSTRPAGAVAFGSD
SILAASSWNGEIKLMDVPNLNTKAVLRGHVDKVSALKWARNILLSGCGEGKLLFWDSSTE
GNEYTAYRTVSEAHKGRIAGLDVHPSGQWAATASYDYTWALWDIESGTKLLSQEGHSKGV
HSVAFHPDGALVASAGLDAVGRVWDMRSGRSIQTLEGHIREIYSLGWSGNGFYLASGSAD
GSVRIWDLRAQKCSHTIPAHTKIVSSVQFDKSGSFLASTGYDGDFNIWNADSWTLAKRWK
TQDRIMGMDLGPGNEYFATCGWDRTVKLWCKE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgtggatctggagtcgatcaagacgacggtggactcttcttcagttcgggaa
gaggccgttgcggcccgtcagctgttggaaaaacaacgtcgagctgatattctcaaaaaa
ctgcatgttcctacagacgataaggatgttagagcgaaactacgatcgttgaatgagccc
attactcttttcgcagaagacaaagctgatcgacggacccgtctgggtcagctaatggtg
gacgagtttgatcgggaaggtctgcaggacgaagagagcgattctgacgtttctatggac
gacgacgagttttttacgccaggaagtgaagagttgcttgatgcaaggaggcagataaca
aacgacagtatcttgagagcaagggaccgactcacgacacaaaagcaacagtcggaattg
tccctggtggagacagttaacctacgacgagataagatggcccctatagagcagtatcag
cttctgggatcacagttcgtttccacacgtccagcaggggccgtggcttttggaagcgac
tctatactggctgcatcatcgtggaacggcgagatcaagctaatggatgtaccgaatctg
aataccaaggctgtgttgagagggcacgtggataaagtaagtgctttgaaatgggcacgt
aatatcttgctgagtggatgtggagagggaaagctgctgttctgggattccagcacagaa
ggcaacgaatatactgcatacagaacggtgtctgaagcccacaagggccgtattgcaggt
ctagacgttcatccaagcgggcagtgggctgctaccgcgtcctatgactacacctgggct
ctgtgggacattgagagcggtaccaagctgttgtctcaagaaggacactctaagggtgtc
cactctgtggccttccacccggatggagctctagtagcctctgctggcttggatgcagta
ggcagagtgtgggatatgcgatctggacgaagtattcagactctggaaggccatatccga
gagatatacagtctgggatggtctggtaacgggttctatcttgcatctggatctgctgac
ggatctgtcagaatatgggatctgcgtgctcaaaaatgttcccacacaatccctgcacat
acaaagattgtgtcgagtgttcagtttgacaagtcgggctcatttctcgcatctacggga
tacgatggcgactttaacatctggaatgccgattcgtggaccctggctaaaaggtggaag
acgcaagaccgaatcatgggcatggatttgggacctggaaacgagtacttcgccacctgt
ggctgggatcgaacagtgaagttgtggtgcaaggagtag
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