Yarrowia lipolytica: 2911766
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Entry
2911766 CDS
T01033
Symbol
YALI2_E00393g
Name
(RefSeq) DNA topoisomerase 2-associated protein pat1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2911766 (YALI2_E00393g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2911766 (YALI2_E00393g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2911766 (YALI2_E00393g)
mRNA degradation factors
5'-3' decay
Decapping complex
2911766 (YALI2_E00393g)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
2911766
NCBI-ProteinID:
XP_504149
UniProt:
Q6C5B3
LinkDB
All DBs
Position
E:2438124..2440676
Genome browser
AA seq
850 aa
AA seq
DB search
MSFFGIAQPNQGNVQEYEFDDTYDDNLGGQLDESGDAFNDETFGGEASVGRDFDFHGETA
KISYAIDEDQVAYERRAPQHAQMQHQQQQHQQRQAPPSLQPMASLWGAPDQKERIMGDEA
QHGGQQAQQAHLQQQQHYQHVAAQQGGQQPLSLEQIEAQLMGRQAQAQGQQQQQHGVPPQ
GHAPPQGHFPPGYGYQGFPPGYPPPQGHPMQYQQPWQFPPLPNHDLNMQMMMHYQQQQQQ
QQQGQGQFQQPQFQGQSQGQPQVQVQQQQQQQQQPQAQTQGQPPAVASQPASQQQAAPPT
APLGPKEDKAIPTAPQGFQGPPHSGPYGYQPGPVHVSPNHTIPPMDENARLAKRNEMISK
RKPHNNLMTGGDKDFVLRVQLQQMVTEDPYNEDFYYQVHSAINVRSNPNQPLDAFARTYL
YQRGQRGRRARGNENGLQRLQQQVHKAVQFVKDHPKKDSIISQGALGKIHLGSNKGPRQA
LDLRKRDDTPDADNSTEAPTEGVSATPELRSATPVATTTTTTDAIRSITTSISKFNLQGG
SYVSANDKRGILRAIENVYIVLLRLEAAERTQPENDLSDEFQVWKGEKDALVTQLWRELQ
ITAPIDQADGSLHPFIAMLSHAKCKKAIPRVFRHISAEQRLTILTMIMAHIGDLDVVKNG
HYSGEESNLPAKSREAIEVFSQTVLPPLVQYISEAEYGVIVGLLELMMDRNDTAAVVKTK
VGSAFVTVLISRAELINQEGSVSAEDEETWNRIFNRVFGIVQRNNLNSLFPPRNVDDSYV
WQFLASIALAAKIDHQRVMVDDVRDKIFGTMNEAKALPPDLSQQKINNLNLFLNVMGLNA
TTSEIGELQG
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcttcggtatcgcacagcccaatcagggcaacgtgcaggagtacgaattcgac
gacacgtacgacgacaatcttggcggacagctggatgagtctggcgacgccttcaacgac
gagacgtttggcggcgaggcgtctgtgggccgggatttcgacttccacggcgaaacggcc
aaaatctcgtacgccattgacgaggaccaggttgcctacgaacgccgggcgcctcagcac
gcccagatgcagcaccagcagcagcagcatcagcagcgacaagctcccccttctctgcag
cccatggcgtctctgtggggcgctcccgaccagaaggagcgaatcatgggcgacgaggcc
cagcacggcggccagcaggcccagcaggctcacctgcagcagcagcagcactaccagcat
gttgctgcccagcagggcggtcagcagcctctgtctctggagcagattgaggcgcagctg
atgggtcgacaggcccaggcccagggccagcagcagcagcaacacggtgtgcctccccag
ggtcacgctcctcctcagggccactttcctcccgggtacggctaccagggcttccctcct
ggttaccctcctccccagggacaccccatgcagtaccagcagccctggcagttccctccc
ctgcccaaccatgatctcaacatgcagatgatgatgcactaccagcagcagcagcagcag
cagcagcagggacagggacagttccagcagcctcagttccagggacaatctcagggtcag
ccccaggttcaggttcagcagcagcagcagcagcagcagcagccccaggctcagactcag
ggtcagccccccgctgtcgcttctcagcctgcttctcagcagcaagctgcccctcctacc
gcgcccctaggccccaaggaggacaaggccatccctaccgctcctcagggcttccagggc
cctccccactcgggtccctacggctaccagcccggccccgtgcacgtatcgcccaaccac
acgatccctcccatggatgagaacgcgcgactggccaagcgaaatgagatgatcagcaag
cgaaagccacacaacaatctcatgaccggcggtgacaaggactttgtgctgcgagtccag
ctccagcagatggtcaccgaggacccttacaacgaggacttttactaccaggtgcactcg
gccatcaacgtgcgatccaaccccaaccagccgctcgacgcctttgcgcgaacgtacctg
taccagcggggtcagcggggccgacgggcccgcggcaacgagaacggcctgcaacgtctg
cagcagcaggtccacaaggccgtgcagtttgtcaaggaccaccccaagaaggactccatt
atctcccagggtgctctcggtaagattcacctcggcagcaacaagggtcctcgacaggct
ctcgacctgcgaaaacgagatgatactcccgacgccgacaactctactgaggctcctact
gagggagtttctgccacccccgaacttcgatctgctacccccgtggccaccaccaccacc
accaccgatgccattcgatccatcaccacgtcaatctccaagttcaaccttcagggcggc
tcgtacgtgtctgctaacgacaagcgaggtattctgcgggccattgagaacgtgtacatt
gtgctgctacgtctggaggctgcagagagaacccagcccgaaaacgacctgtccgacgag
ttccaggtgtggaagggagaaaaagacgcgctggtgacccagctgtggcgtgagctgcag
attactgcgcccatcgaccaggccgacggctcgctgcaccccttcattgccatgctctcg
catgccaagtgcaagaaggccattccccgagttttccggcatatttctgccgagcagcgg
ctcaccattctgaccatgatcatggcccacattggcgatttggacgtggtcaagaatggc
cactacagcggcgaggagtcgaacctgcccgccaagtcgcgggaggccattgaggtcttc
tctcagaccgtccttcctcctctggtgcagtacatttctgaggccgagtacggcgtcatt
gtgggtctgctggagttgatgatggatcgaaatgacactgctgctgttgtcaagaccaag
gttggatctgcatttgtgactgttttgatttctcgggccgagctgatcaaccaggagggc
tctgtttctgccgaagatgaggagacctggaaccgcattttcaaccgtgttttcggcatt
gttcagcgcaacaatctcaactctctgttccctcctcgaaatgtggacgattcttacgtg
tggcagttcctggcgtccatcgccttggctgcgaagattgatcaccaacgtgttatggtt
gacgatgtgcgggacaagatctttggtactatgaacgaggccaaggctcttccgccagat
ctgtcgcagcagaagattaacaatctgaacctgttccttaacgtcatgggtctcaatgcg
accacttcggagattggtgagttgcaggggtga
DBGET
integrated database retrieval system
