Yarrowia lipolytica: 2912105
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Entry
2912105 CDS
T01033
Symbol
YALI2_E01711g
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
yli
Yarrowia lipolytica
Pathway
yli03013
Nucleocytoplasmic transport
yli03015
mRNA surveillance pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2912105 (YALI2_E01711g)
09122 Translation
03013 Nucleocytoplasmic transport
2912105 (YALI2_E01711g)
03015 mRNA surveillance pathway
2912105 (YALI2_E01711g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912105 (YALI2_E01711g)
03041 Spliceosome [BR:
yli03041
]
2912105 (YALI2_E01711g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
2912105 (YALI2_E01711g)
Spliceosome [BR:
yli03041
]
Complex C
Other components
EJC/TREX
2912105 (YALI2_E01711g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
RRM_8
RRM_9
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
2912105
NCBI-ProteinID:
XP_503462
UniProt:
A0A1H6Q6L3
Q6C7A0
LinkDB
All DBs
Position
E:complement(join(409861..410186,410247..410267,410341..410356))
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AA seq
120 aa
AA seq
DB search
MGITENEPTPLRSTEGWIIIVDNLHPEISEEDLTDFYSTYGDVQVAHVNLDRRTGYAKGY
ALLQFATKDDADTAIAETNGVEFLEHNLEVSFAFHEADTSISQHRIRGSENRSRSPGRRR
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgggtattacagaaaacgaacccacacctctacgatccacggagggatggatcatcatt
gtcgacaacctacatccagaaattagtgaggaggatctcacagacttctacagcacatac
ggagatgtccaggtagcccacgtcaacctggatcgaagaactggttacgccaaagggtat
gctctcctccagtttgccaccaaggacgatgccgatacagctattgcagagactaacgga
gttgagtttctggagcacaacctggaggtgtcgttcgccttccatgaagcagacacctcc
atttcacaacatcgaattcgtggatctgagaatcggagcaggagtcctggacgaagacga
tag
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integrated database retrieval system
