Yarrowia lipolytica: 2912116
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Entry
2912116 CDS
T01033
Symbol
YALI2_E00062g
Name
(RefSeq) Putative nucleoporin
KO
K14312
nuclear pore complex protein Nup155
Organism
yli
Yarrowia lipolytica
Pathway
yli03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2912116 (YALI2_E00062g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912116 (YALI2_E00062g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2912116 (YALI2_E00062g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
2912116
NCBI-ProteinID:
XP_503470
UniProt:
Q6C792
A0A1D8NGW3
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All DBs
Position
E:join(426382..426811,426862..430736)
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AA seq
1434 aa
AA seq
DB search
MVPNKRSSGSFGGFANNAAGSSTPGTTPPNRSRSSMGNHSTGKVSNSSFGNALRPSAGLH
NGHNGLASSSVPGLGNGVVNHVLGAVPISSSSSSWLQTKKPKELGTVSVNEMSAKQPLEL
GSEFVEAYLNRDDKYPELDRLVMQGQLSEYIFAQSGDLGALTPFTRTEVINMPDELYEQY
NHTETSTKMGMFSEIDRIWMTVDNRIYFWSYIDQAYHAFEGLEHTITSVSLVKPKANTFI
DLISHVLVLTTPLEVYLVAVGYNKTTDEFELFDTGMHTSIKGLDVDQVIASKDTGRVFFT
GPGDGTNVYELIYNNQDRWFRDKCSKVCRTKNSIVASLQPIAIGEVAGEGTGILGKLVSS
FLPSHEREVIVQMVIDDSRKLLYTLSSTSTMRVYHMATDDLKLTFTYTFPQVLSHLQMIT
ASTPTSHAPNHGAHGHAHGHGTASHTGTNSRTKPATPLISKQTKIVSIKPVMATESSQIH
LVAVTSSGWRLYIRAARSYTFGAGGTAPSASNPPTFMQVIQVRFPPSSSPEAVPPMQSKV
LSGTLGTSRLFEPGHFFAVVPAETEEEGDKAMPTSDRVFVAAPDTGRILYQQSSLAAAAN
PVYIENASFLEVDGFVQSIQLLTPPFRATNHPEGFGNESACQYEKSAHQKVAVLTQTGLH
IYERTLPYETFQRLGGDVKTFFDLYGRTETCATALSLASMNISSPEERELARKVYIEVGG
RAHLVDDDTNYGITAASVTPTGTTSSPPQVVKLSGRFEGLATYLSRAIRPLWQQNVFALV
PRVVNGEAKEQFVLKLSREHIEDAQVRLIEISEFLTKNKTFIEGLAGADRVVLGGNRAEE
TALLAEHTALNALVKLVNNMKEATALLQLLQDETASAPNGIESIMVYLTPAAREQMAKLK
FFELVTRKAGIDLAKELVTCLVNKAIADGGSVESVASILEDRCNSYCSASDVLTYKAIEA
LKRAKDVGVRDPELRQQLLAESVRLFEKTAGSLSIDSLSESIDLYCEQGYYTGAIQVALS
VAQEMDRANVAAAYILDDMPEGDVRQETYEKRVKVYSMVFGVLERVVEDSPVNSPVPNEA
YDIALASTDEVFQYCFYDWFIETGNSARLLDLDTPYILPYLVNNAKKSVNMADLLWCYYQ
MRGSVISAAEVLFDIATSTKFVLPLAQRIECLSRARGYVNCPAPITSRQQLAQLTTRIQE
LLEVSSIQDDILTNVKKDPRFHDARRQETMAKLDGPIMGVSELFNLYADPLQYLESCLAL
FQVSDYRQNDEILNCWNKLIVQTDQKGEEDHDGDRAQSYEYVANMVQRLGKQFMVSEFVF
PYDQLIPILELYRVQHQPDSPVGWVVDTFLGASLGYETVYTCLSDMIERREYPFSEEHAM
RLLALDVIYLLEKWLAESRGIAQIQNVVSADMLDTLEQYTSQGDVAGLRRRLRI
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggtacccaacaagaggtccagtgggtcctttggtggatttgcaaacaatgctgctggg
tcatcgaccccaggaacaaccccgcccaacaggagccgatcctcgatgggcaaccattcg
accggcaaggttagcaactcgagctttggaaatgcattgagaccctcagccggcctccac
aacggacacaatggcctcgcctcttcctctgtccctggacttgggaatggtgtggtcaat
cacgttcttggagcagtccccatctcgtcatcatcgtcaagctggctccagaccaagaag
cccaaggagttaggtacagtgtctgtcaacgagatgtcggccaagcagcccctcgagctt
ggctccgagttcgtggaagcctacctcaacagagacgacaagtatcctgagttggataga
cttgtgatgcagggacaattgtccgaatacatttttgctcagtctggtgacttgggagca
ctgacgccattcacacgaacggaggttatcaatatgcctgacgagctctatgagcaatac
aaccacacggagacaagcaccaagatgggcatgttctcagagattgaccgaatctggatg
actgtggacaaccgaatctacttctggtcctacatcgatcaagcctaccatgccttcgag
ggactggagcacacaatcacgtcggtgagtctggtaaaacctaaggccaacaccttcatc
gaccttatttcgcatgttttggtcctcaccaccccactagaggtctacctcgttgccgtg
ggatacaacaagaccacagatgagtttgagcttttcgatacgggcatgcacacctctatc
aagggtctggatgtggaccaggttattgcttccaaggacactggaagagttttcttcaca
ggtcctggcgacggcaccaacgtctacgagcttatctacaataatcaggacagatggttc
cgagacaagtgttccaaggtctgccgaaccaagaacagcattgtcgcttctttgcaaccc
attgctatcggtgaggttgctggtgaaggtactggcattctgggtaaactggtgagttcc
ttcctcccatctcatgagcgagaggtgattgttcagatggtcattgacgactccagaaag
ctgttatacactctgtcatccacctctactatgagagtgtaccacatggccaccgatgat
ctgaaactcaccttcacttacaccttcccccaagtgctgtctcatctgcagatgatcacc
gccagcacccctacctcgcatgcgcccaatcacggcgcccatggtcacgcgcatggccac
ggtactgcttctcataccggaaccaacagccgtaccaagccggctactcccctcatctcc
aagcaaaccaagattgtttccatcaagcccgtcatggctactgagtcttctcaaatccat
ctcgtggctgtgacctcttccggctggagattgtacattcgggctgcgcgatcttacacc
tttggtgctggaggaacggcaccttctgcatccaacccccccacattcatgcaggtgatc
caggttcggttccctccttcctccagccccgaggccgtgcctcccatgcagtccaaggtt
ctgagcggcaccctgggcacctctcgtctctttgagcctggccacttctttgctgtggtc
cctgccgagactgaggaggagggtgataaggccatgcccacgtcagaccgagtttttgtg
gctgctcccgacaccggacgaatcctgtaccagcagtcatctctggctgcagctgctaac
cctgtttacattgagaacgcctccttccttgaggtggatggtttcgtgcaatctatccag
cttcttactcctccattccgagccacaaaccatcccgagggcttcggaaatgagtctgcc
tgtcaatacgaaaagtctgcccatcagaaggttgccgttctcacccagactggtctccat
atttatgaacgaactcttccctatgagaccttccagcgtcttggaggcgatgtcaagact
ttctttgacctctacggccgaaccgagacttgtgctactgccctgtctctggcttccatg
aatatttcgtcccctgaggagcgagagctggcccgaaaggtctacattgaggtcggtgga
cgagcccacctcgtcgacgatgacactaactatggtattactgctgccagtgtgacccct
accggtaccacctcttctcccccacaggttgtcaagctgtcgggcagatttgaaggcctg
gccacctacctttctcgagccatccggcccctttggcagcaaaacgtctttgccctggtg
ccccgagtcgtcaacggcgaggccaaggaacagtttgtgctcaagctatcgcgagaacac
attgaggatgcccaagtacgtctcattgagatcagcgagttcctgactaagaacaagacc
ttcatcgagggtcttgctggagccgaccgagtggttctgggcggaaaccgagccgaagag
accgctcttcttgctgaacataccgctctcaatgctcttgtcaagttggtaaacaacatg
aaggaggccacagctcttctgcagctgctccaagacgaaactgcatctgcccccaacgga
attgagagtatcatggtgtacctcactcctgctgctcgagagcagatggctaagctcaag
ttcttcgagctggtcactcgaaaggctggcattgatctggccaaggagcttgtcacctgt
cttgtcaacaaggccattgctgatggaggatcggttgagtctgtggctagtatccttgag
gatcgatgcaactcgtactgttctgcatcggatgttcttacttacaaggccattgaagct
cttaagcgagccaaggacgtaggtgttcgagaccctgagcttcgacaacagctgctggct
gagtccgtcagactgtttgagaagactgccggaagcctcagcatcgactctctttccgag
tccatcgatctctactgcgaacagggatactacactggggccattcaggttgctctttct
gttgctcaggagatggacagagccaatgttgctgcagcatacatccttgatgacatgcct
gaaggtgatgttcgtcaagagacttacgagaagcgagttaaggtctactcgatggttttt
ggagtgcttgagcgagtggttgaggattctcccgtcaactcccctgtccccaacgaggct
tatgacattgccctggcttccaccgatgaggtcttccagtactgtttctacgactggttc
atcgagactggaaactcggctcgtttgctggacctcgacaccccttacattctgccttac
cttgttaacaatgcgaagaagagcgtgaacatggccgacctgctgtggtgttattatcag
atgcgaggcagcgtcatttctgctgccgaggttctgttcgacattgccacctcgaccaag
tttgtgcttcctctggctcagcgaattgagtgtctgtcccgagcccgaggctacgtcaac
tgccctgcccccatcacttctcggcagcagcttgctcagctgaccacccgaattcaggag
ctccttgaggtttcttctatccaggatgacattctcacaaacgtcaaaaaagacccccgg
ttccatgatgctcgacgtcaggagaccatggccaaacttgatggccctatcatgggtgtt
tctgagctttttaacctgtatgccgaccccctgcaataccttgagtcttgtttggcttta
ttccaggtgtctgactaccgacagaacgatgagattctcaactgctggaacaagctcatt
gtgcagaccgaccagaagggagaggaggaccacgacggtgaccgcgctcagtcttacgag
tacgttgccaacatggtgcagcgtctcggtaagcagttcatggtgtctgagtttgtcttc
ccttatgaccagcttatccctattctggagctctatagagtccagcaccagccagactct
ccggttggatgggttgtcgacacattccttggtgcatctcttggctacgagactgtctac
acctgtctgtcggacatgattgagcgacgggagtaccccttctccgaggagcatgccatg
cgattgctggctctggatgttatttatcttttggaaaagtggttggctgagagccggggc
atcgcgcagatccagaatgtagttagtgccgatatgctcgacactctggagcagtacacg
agccaaggagacgttgcaggtctgcgaagacgactgcgaatttaa
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