Yarrowia lipolytica: 2912124
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Entry
2912124 CDS
T01033
Symbol
YALI2_E01704g
Name
(RefSeq) Pre-mRNA polyadenylation factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
yli
Yarrowia lipolytica
Pathway
yli03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
2912124 (YALI2_E01704g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912124 (YALI2_E01704g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
2912124 (YALI2_E01704g)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
2912124
NCBI-ProteinID:
XP_503478
UniProt:
Q6C784
A0A1D8NGX9
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Position
E:complement(446406..447071)
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AA seq
221 aa
AA seq
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MDDDDDFLYGTEEPAVKRARVEPEGAEDDEEPHSQTTKQQEPEDDSDSEYESDDSDIDIV
IDTGAPSKLASTASAAAKKEAPAASSAAPEASDTPKEESASEERPQPAAKMPGIDIEKVG
MLDGKPITEHNLEDFEDKPWRMPGADITDYFNYGFDEFTWMAYCDKQNQIRGEYNPQNMM
AMMGMSMMGMPGMPGGGQMPMPGGEGMPDMFKMMQGMNPPK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacgacgactttctctacggcaccgaggagcctgcggtaaagcgggcccga
gttgagcccgagggagctgaggatgatgaggaaccacactcgcagaccacgaagcaacaa
gaaccggaagatgattccgattctgaatacgaatccgacgactctgacattgatattgtc
atcgacaccggcgcgcccagcaagctcgcttctacggcatccgctgctgctaagaaggag
gccccggcagcttcttctgcggcacctgaggcttctgatacccccaaagaagagagcgcg
tccgaagagcgaccccaacctgcggccaagatgcctggaatcgacatcgaaaaggtcggt
atgctggatggaaagcctatcactgagcacaacctagaggacttcgaggacaagccatgg
cggatgcctggtgccgatatcactgattacttcaactacggcttcgatgagttcacctgg
atggcctactgtgacaaacagaaccagatccgaggcgaatacaacccccagaatatgatg
gccatgatgggcatgtctatgatgggtatgcctggtatgcctggtggaggtcagatgccc
atgcctggtggcgagggcatgcctgacatgtttaaaatgatgcagggcatgaacccaccc
aagtag
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