Yarrowia lipolytica: 2912158
Help
Entry
2912158 CDS
T01033
Symbol
YALI2_E00084g
Name
(RefSeq) Exosome complex exonuclease DIS3
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2912158 (YALI2_E00084g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912158 (YALI2_E00084g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
2912158 (YALI2_E00084g)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_CSD1
Rrp44_S1
PIN_4
OB_Dis3
OB_HELZ2
CSD2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
2912158
NCBI-ProteinID:
XP_503507
UniProt:
Q6C755
LinkDB
All DBs
Position
E:530245..533205
Genome browser
AA seq
986 aa
AA seq
DB search
MSAVKRASNHSTLSQKVFVRTSKAGNATKVVREQYLRDDIPCSSQGCQYCKNNLYVADAT
GKRQEPILETQPNKTTKRGPHYLVVDTNIVLDGIDLLESDKGFYDVIVPQIVLEEVRNRS
LPIYARLRALTKNDDKRFYVFHNEYCKDTAVGRNKGESINDRNDRAIRKVCEFYTQHLGK
DYNGTAPEVVLLSNDVNNRKLAKEEGITALGLKGYVSELVDPGQLIDMIPQRALEEEEGA
KPKSGKSEALYPEYYPMSRLLGGIKNGTLFQGNLTISPYNVLEGSVSTKAYPKPLLILGR
QSLNRAFSGDQVVVELLPKDKWKTPSTSVIESEDLAANEGGEESGDTVMSESERKLLADD
ALKAHKNEADAAERVQPTARVVGIIKRSWRYYVGHIAPGSIIDDVSRGPRSVLVALMDKT
LPRVRIRTRQAAALQGRRIVVAVDSWPADSRHPEGHFCRDLGPIESKQAETEALLLEHDV
EYRPFTKAVLDCLPAEGPDWKVPQDLVKEAAEKDPLVAKRRDLRHLNICSIDPPGCQDID
DALHARVLPNGNYELGVHIADVTHFVKPDTALDQEGASRGTSVYLVDKRIDMLPMLLGTN
LCSINPYVERYAFSVLWEMTPDGKIVNTDFTKSIISSREAFSYAEAQARIDDPSKTDELT
EGMRVLLKFSKQLKQGRIDAGALNLASPEVKVHIDSETSDPGEVEVKELLETNSLVEEFM
LLANTSVAKKIYESFPQTAMLRRHGAPPATNFETLNDQLRTIKGMSISLESSKALADSLD
KCIDPNEPFFNTLVRIVATRSMLAAEYFSSGSYAYPEFRHYGLASEIYTHFTSPIRRYAD
VVAHRQLAAAIGYEPLHQSHREKDHMESICKNINVRHRNAQFAGRASIEYFVGQALKNVT
KEEDAIHEGYVIKVFNNGVVVLVPKYGLEALIHIDDLGDAETAVFNEKEYKLDISGKSIR
VFDKVKVKVESYKDKQEKRKVKMVLL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgtgaaacgagcatcgaaccattcgacgttatcgcagaaggtgtttgtgcga
acttccaaggccggcaacgccaccaaggtcgttcgagagcaataccttcgagatgatatc
ccctgctcgtcccagggctgtcagtactgcaagaacaacctgtatgttgctgacgccact
ggaaagcgacaagagcccattctcgagacccagcctaacaaaactaccaagcgtggcccc
cattacctcgttgtcgacacaaacattgtcctggacggtatcgatctgctggaaagtgac
aagggcttctatgatgtgattgtgccccagattgtgctggaagaagtgcgaaaccgatcg
ctgcctatctatgcgcgactgcgagccctcaccaagaacgacgacaagcggttctacgtc
tttcataacgaatactgcaaggacactgctgttggtcgaaacaagggagagtccatcaac
gaccgaaacgacagagccatcagaaaggtgtgcgaattttacacccaacatcttggtaag
gactacaacgggaccgcgcccgaggtggttctgctttccaatgatgtcaacaaccgaaaa
ttggcaaaggaggagggaatcactgccctcggtctcaagggatacgtttccgagcttgtg
gaccccggccagctcatcgatatgatccctcagcgagctcttgaggaggaggagggagcc
aagcccaagagcggcaagtccgaggcgctttaccctgaatactaccccatgtctcgactt
ctaggaggaatcaagaacggcactcttttccagggaaacctcaccatatccccttacaat
gttctcgagggttccgtttcaacaaaggcgtacccaaagcctctcttgattcttggccga
cagtctctcaaccgtgcattctctggtgaccaggttgtcgtggagcttcttccaaaggac
aagtggaaaactccctccacgagtgtgattgagagtgaagatcttgctgccaatgagggc
ggtgaggagagtggagacaccgtcatgagcgagtctgagcggaaactgctggctgacgat
gccctcaaggcccacaagaacgaggccgatgctgctgagcgagtccagcctaccgctcga
gttgtcggtatcataaagcgatcttggagatactacgttggtcacattgctcctggctca
atcattgatgacgtctctcgaggccctcgatctgttctggttgctctcatggacaagact
ctgccccgagttcgaatcagaactcgacaggccgctgctctccagggacgacgaatcgtc
gttgccgtggactcttggcccgctgactctagacaccccgagggtcatttttgccgagac
cttggtcccatcgagtccaagcaggctgagactgaggcgcttctgctggagcacgatgtc
gaataccgacctttcaccaaggctgttctagactgtcttcccgccgagggtcccgactgg
aaggtcccccaggatctcgtcaaggaggctgccgagaaggatcctcttgttgccaagcga
cgagatctacgacatctcaacatctgctccatcgatcctccaggatgtcaggatatcgat
gatgctctgcacgctcgagttcttcccaacggaaactatgagcttggtgttcacattgct
gatgtcacgcactttgtcaagcccgacactgctctggatcaggagggtgcttctcgaggt
acctctgtctaccttgtcgacaagcgaatcgatatgttgcccatgctgctcggtaccaac
ctgtgttctattaacccttatgtggagcgatatgctttctctgttctctgggagatgact
cccgacggcaagattgtcaataccgatttcacaaaatccatcatttcttcccgagaggcc
ttttcgtacgcagaggctcaggcgcgaatcgacgacccctccaagactgacgagctcact
gagggtatgcgggttctgctcaagttttccaagcagcttaagcagggccggatcgacgcc
ggtgcactgaacctggcttctcccgaagtcaaggtccatattgactctgagacctccgat
ccgggagaagttgaggtcaaggagcttctcgagaccaactctctggttgaggagttcatg
ttgctcgccaacacttctgttgccaagaagatttacgaatctttccctcagacagccatg
ctccgacgtcacggagctcctcctgccaccaacttcgagaccctcaacgaccagcttcga
accattaagggtatgtccatctctcttgagtcttccaaggctctggcagactctctggat
aagtgtattgaccccaacgagcccttcttcaacactctggttcgaatcgtggctaccaga
tccatgctggctgccgagtacttctcttcgggttcttatgcataccctgagttccgacat
tacggtctggcttccgagatttacacccatttcacatctcccattcgacgatacgctgat
gtggttgctcatcgacagctggctgctgccattggttatgaacctctccaccagtcccat
cgagagaaggaccatatggagtccatctgtaagaacatcaacgtccgacaccgaaacgcc
cagtttgctggacgagcctccattgagtactttgttggccaggcactcaagaacgtgact
aaggaggaggatgccatccacgagggttacgtcatcaaggtgttcaacaacggtgtcgtt
gtgcttgtgcctaagtacggccttgaggctctcattcacattgacgatcttggagatgct
gagactgctgtcttcaatgagaaggagtacaagctcgacattagcggtaagtccatccga
gtctttgacaaggtcaaggtcaaggtggagtcttacaaagacaagcaggagaagcgaaag
gtgaagatggttcttctttag
DBGET
integrated database retrieval system
