Yarrowia lipolytica: 2912197
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Entry
2912197 CDS
T01033
Symbol
YALI2_E01672g
Name
(RefSeq) Exosome complex exonuclease RRP6
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2912197 (YALI2_E01672g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912197 (YALI2_E01672g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
2912197 (YALI2_E01672g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
2912197
NCBI-ProteinID:
XP_503541
UniProt:
Q6C721
A0A1D8NH38
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Position
E:complement(631082..633298)
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AA seq
738 aa
AA seq
DB search
MEIDSVVRLAQQTAKAARGLASHDIKFYSSIDDKVADSVKENASQLIGVVNQLAQKIAPN
EVGSFPPELDTVNRHWNEFSSVVDDLYEKTDIQLGKLNKKGDKVEIAESKKTGPQTLGEK
IRVGNAIQSSSEIKGPQWKPQEMWEVDNSRDTPFKPKLTSKPNALEPLEDAFELVTEDDR
RDHYPQPYAKEIMEQPYPDEVYEETEVIPNRPWEAEGEDEYIYVDTEEKLRDMVDHLKTQ
EEIAIDVEHHSMRTYYGITCLVQVSSREQDYIIDTIALRNLEIFNEVLTDPKIVKVLHGA
TMDIQWLQRDFGLYIVSLFDTFHAAQALGLKGHSLAFLLQHYANFVTSKKYQLSDWRIRP
MSPEQLLYARADTHFLLNIYDQLKNALVQKDKIEGVLEKSRQTASQRYEYTGYDPRYYLK
SFDYEGGINRLISQFHITGPSVSVAKALFLWRDSMARKEDESTGYVMPNYLLVSLANRMP
QTPEAVFSVSKSLPLLVRKNVEEILDVIKESKDEHVEVEQVEEEPVLAAESIEGAEFSEI
AEVIFLAAQDGQSDITGKFDSSKSSIVHVKETALGPLGVSKIDKHMMVLAVPVAPLSVDS
TESDSEVQNAEEEVKVEQDAAADNESDYSEDEHEHANDIIIAKSNKKYTADKEAKKGVAK
EKSEEFTPFDYSAGASILKSDDQKAAEKKAAMTARKQKAKEKKQFNPYEIKEDAKGASKR
RGPKDGGARSVQYKKRRT
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgatagtgttgtgcgactggcccaacagactgccaaggctgcccgtggtctt
gcttcgcacgacatcaagttctacagctctattgatgacaaggtggccgacagcgtgaag
gagaatgcatcacagctcattggagtggtcaaccagctggcccagaagattgccccgaac
gaagtgggatcttttcctcccgagctcgacactgtgaaccgacactggaatgagttctcg
tctgttgtcgatgacctgtacgagaaaaccgacattcagctcggaaagctgaacaaaaag
ggagacaaggttgagattgccgagtccaagaagactggccctcagacgctcggagagaag
atccgagtaggaaatgccattcagtcatctagcgagatcaaggggccgcaatggaagccc
caggagatgtgggaggtcgacaattcgagagacactcccttcaaacccaaactcacctcg
aaaccaaatgctctggagcccctagaggacgcgttcgaattggtgactgaagatgacaga
cgagatcactacccacagccctacgccaaggagataatggagcagccctacccagatgag
gtgtacgaggagacagaggtcattcctaaccgaccatgggaggctgaaggagaggatgaa
tacatctacgttgacacagaggagaaactcagagacatggttgaccacctgaagacccag
gaggagatagccatcgatgtcgaacatcattccatgcgaacatactacggcatcacatgt
cttgtgcaggtttcctctcgggagcaagattacatcatcgacaccatcgctctccgaaac
ctcgagatcttcaatgaggttttgactgaccccaagattgtcaaggttttgcatggagcc
actatggatattcagtggctccaaagagatttcggtctgtacattgtgtctctgttcgac
accttccatgccgcccaggcccttggcctcaagggacacagtttagcgttccttctccag
cattacgccaacttcgtcacttctaagaagtaccaactcagtgactggcgaattcgacct
atgtcgcctgagcagcttctctacgcccgagcagatacccacttcctgctcaacatctac
gatcagctgaagaatgcgctcgtgcagaaggacaagatcgagggagttttggaaaagagc
agacagactgcttcccagaggtatgagtacaccggctacgacccaaggtactatctcaag
tcgttcgactacgagggaggtatcaatcgtctcatttctcagttccacatcactgggcct
agtgtctcagtcgccaaggctcttttcttgtggagagacagcatggctcgaaaggaggac
gagtctactggctacgtgatgcctaactatctgctcgtttcacttgccaaccgaatgcct
caaacgcccgaggctgtgttcagtgtatccaagtctctcccgcttcttgttcgaaaaaac
gttgaggagattctggacgtcatcaaggaatccaaggacgagcatgttgaggtagagcag
gttgaggaggagcccgtcctcgctgccgagtctattgagggggcagagttttctgaaatc
gcagaggtcatcttcctggcagcccaggacggacagtcagatatcacaggcaaattcgac
tcttccaagtcgtctattgtacatgtaaaggagactgctctaggtcctcttggtgtttcc
aagattgataagcatatgatggttttggcggttcccgtcgcacccctatctgttgactct
actgaatctgatagcgaagtccagaacgctgaggaggaggtcaaggttgagcaggatgcc
gctgctgacaacgagtctgattactctgaagatgagcacgagcatgccaatgatatcatt
attgccaagtctaacaagaagtacacagctgacaaggaggctaagaagggagtagcaaag
gagaagtccgaggagttcactccgtttgactactctgctggtgcttctattctcaagtcc
gacgatcagaaggccgccgagaagaaggctgccatgactgcccgaaaacagaaggccaag
gagaagaaacagtttaacccctacgaaataaaggaggatgccaagggtgcttctaagcga
cgaggacccaaggatggaggtgctcgatcagtccagtacaagaaacggcgtacatag
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