KEGG   Yarrowia lipolytica: 2912263
Entry
2912263           CDS       T01033                                 
Symbol
YALI2_E01208g
Name
(RefSeq) ATP-dependent RNA helicase DBP2
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
yli  Yarrowia lipolytica
Pathway
yli03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    2912263 (YALI2_E01208g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:yli03041]
    2912263 (YALI2_E01208g)
   03009 Ribosome biogenesis [BR:yli03009]
    2912263 (YALI2_E01208g)
Enzymes [BR:yli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     2912263 (YALI2_E01208g)
Spliceosome [BR:yli03041]
 Complex A
  U1 snRNP components
   U1 related factors
    2912263 (YALI2_E01208g)
 Complex B
    2912263 (YALI2_E01208g)
Ribosome biogenesis [BR:yli03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    2912263 (YALI2_E01208g)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA Utp25_C ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 2912263
NCBI-ProteinID: XP_504478
UniProt: Q6C4D4 A0A1D8NK97
LinkDB
Position
E:complement(join(3367103..3367479,3368240..3369521))
AA seq 552 aa
MSYGDDYNNNDRGYGGGRGFGGGRGGRGGSRGGRGGFGGDRGFGGDRGGYGGGGYQDNDF
GNLPKQDWDLEKLPQFEKNFYKEDPAVTERTDEEVTAFRKENQMTLHGDGIPKPVTNFDE
AGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPAIVHINA
QPMLSHGDGPIVLVLAPTRELAVQIQQECSKFGKSSKIRNTCVYGGVPRGQQIRDLARGV
EIVIATPGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW
SATWPKEVQRLAHDYLKDQIQVNIGSLELSASHNITQVVEVCTEYEKRDRLVKHLETVME
NKESKCLIFTGTKRVADDITKFLRQDGWPALAIHGDKQQQERDWVLNEFRQGKSPIMVAT
DVASRGIDVKGINFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQARDLLV
ILREAKQHIDPKLEEMGGGRGGRGGWGGRGGRGGRGGRGGYRRGGYGGGGYGGGRGSDIT
GSNSAPLSNSRW
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgtcttacggtgacgattacaacaacaacgaccgaggctacggcggcggacgaggcttc
ggcggaggccgaggtggccgaggtggttcccgaggcggtcgaggcggcttcggtggcgat
cgaggtttcggaggtgaccgaggcggctacggcggcggaggctaccaggacaacgacttt
ggcaacctgcccaagcaggactgggaccttgagaagctccctcagtttgagaagaacttc
tacaaggaggaccctgctgtcactgagcgaaccgacgaggaggtcactgccttccgaaag
gagaaccagatgaccctgcacggagacggtatccctaagcccgtgaccaacttcgacgag
gctggtttccccccttacgtcctcaaggaggtcaagcagcagggtttcgagaagcccact
gccattcagtgccagggatggcccatggccctgaccggacgagatgtcattggtatcgct
tccaccggttccggtaagactctgtcttactgcctgcccgccattgtccacatcaacgcc
cagcccatgctgtcccacggtgacggacccatcgtcctggtcctcgcccccacccgagag
ctggctgttcagattcagcaggagtgctccaagttcggcaagtcttccaagattcgaaac
acctgtgtctacggaggtgttccccgaggccagcagattcgagaccttgcccgaggtgtg
gagattgtcattgccactcccggccgacttctcgatatgctcgagtccggaaagactaac
cttcgacgagtgacctacctggttctcgatgaggccgaccgaatgctcgatatgggtttc
gagcctcaaattcgaaagattgtcgaccagattcgacccgaccgacagaccctcatgtgg
tctgctacctggcccaaggaggtccagcgactggcccacgactacctcaaggaccagatt
caggtcaacattggttctctggagttgtctgcctctcacaacatcacccaggttgtggag
gtctgcaccgagtatgagaagcgagaccgacttgtcaagcacctcgagaccgtcatggag
aacaaggagtccaagtgtctgattttcaccggcaccaagcgtgtcgctgacgacattacc
aagttcctgcgacaggacggctggcctgctctcgccattcacggtgacaagcagcagcag
gagcgagactgggttctcaacgagttccgacagggcaagagccccatcatggttgccacc
gacgtggcttcccgtggtattgatgtcaagggtatcaacttcgttatcaactacgactac
ccctccaactccgaggactatgtccaccgaatcggtcgaactggtcgagccggcaccaag
ggtaccgcttacacctacttcaccgaggacaaccgaaagcaggcccgagaccttctcgtc
atcctgcgagaggccaagcagcatatcgaccccaagctggaggagatgggcggtggccga
ggtggccgaggaggctggggaggccgaggcggtcgaggcggccgtggcggccgtggtggt
taccgacgaggtggctacggcggcggtggctatggtggaggacgaggttccgacatcacc
ggctccaactccgctcctctttccaactcccgatggtag

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