Yarrowia lipolytica: 2912344
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Entry
2912344 CDS
T01033
Symbol
YALI2_E00137g
Name
(RefSeq) Exosome complex component mtr3
KO
K12587
exosome complex component MTR3
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2912344 (YALI2_E00137g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912344 (YALI2_E00137g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
2912344 (YALI2_E00137g)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
2912344
NCBI-ProteinID:
XP_503612
UniProt:
A0A1H6Q6Z9
Q6C6V0
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All DBs
Position
E:825661..826449
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AA seq
262 aa
AA seq
DB search
MTDRRRVLGPADAVPFTLDNIKPTEVEQKSLDIGSIFVKTGVVENANGSAYLELDDIKIV
AIVHGPRPMRGLFTTSAILNVDTKFLPVSLCDIESKSAVVSSTQLTQYIRSASTTQSSSL
QKNVSSYVHTSLLPSILVEKYPKSTIDVSISVLSSSNNTKTTVAAAVSCAGAALADSGLE
CTDIVTAGSVLLDENKATVSPSRAPTSEIDGVVSYMAASKKIVGMWIEGGNVSEKQMEEI
FDKTEEMAREIRGVMHGVLLEQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgaagacgagttttggggcctgctgacgcggtgccattcaccctggacaac
atcaagccgaccgaggttgagcagaaaagcctggatatcggcagcatcttcgtcaagacc
ggagtggtcgaaaacgcaaacggatcggcctacttggagctggatgatatcaaaattgtg
gccattgtccatggtcctcgacctatgagaggtctgttcacaacatcggccatcctgaac
gtggacacaaaatttctccctgtctctctctgcgatattgagagtaagagtgctgtggtt
agctccacccagctgacccaatacattcgatctgccagcaccacacagagctcttctctg
cagaagaacgtttcatcgtacgtccacacctctctcctgcccagcatattggtcgagaag
taccccaagtccaccatcgatgtcagcatatcagttctgtcttcttccaataataccaag
accaccgtggctgccgcagtttcgtgcgctggcgccgctctggccgattccggtctcgag
tgcaccgatattgtgacagcaggaagtgtgctgctcgatgagaacaaggcaactgtgtcg
ccctcaagagcacctaccagcgagattgacggagtagtatcctacatggcagcaagcaag
aagattgtgggcatgtggattgaaggcggtaacgtgagcgagaagcagatggaggagatt
ttcgacaagaccgaggagatggcccgggagatcagaggagtcatgcatggagttttgttg
gagcaataa
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