Yarrowia lipolytica: 2912373
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Entry
2912373 CDS
T01033
Symbol
YALI2_E00526g
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03030
DNA replication
yli03410
Base excision repair
yli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2912373 (YALI2_E00526g)
03410 Base excision repair
2912373 (YALI2_E00526g)
03420 Nucleotide excision repair
2912373 (YALI2_E00526g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yli03032
]
2912373 (YALI2_E00526g)
03400 DNA repair and recombination proteins [BR:
yli03400
]
2912373 (YALI2_E00526g)
Enzymes [BR:
yli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
2912373 (YALI2_E00526g)
DNA replication proteins [BR:
yli03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
2912373 (YALI2_E00526g)
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
2912373 (YALI2_E00526g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
DNA_pol_B
zf_DPOE_2
DNA_pol_B_exo2
NAPRTase_C
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
2912373
NCBI-ProteinID:
XP_504422
UniProt:
Q6C4J0
A0A1H6Q1W7
LinkDB
All DBs
Position
E:join(3226341..3226766,3226952..3227103,3227194..3233167)
Genome browser
AA seq
2183 aa
AA seq
DB search
MGRPFNGNNTHVVKQRSDEFERRRLERIEQLGQKFAAVERRDAIDDRMGFTRFSGDEKRV
GWLVNMHETLLQSETAERGLAAVDYYFYDEEGGNFKSTVVFRPYFFVICKPHTEHAVKDL
MEKMFERVLASTEIVTKEDLNLTNHLTGKKRKAVKLEFHNSEDLSSTRFTLSKIVDRQTQ
QTEQHLNIYELEGDVDTSTDVESSITGIKEFDVPFETRVAIDLDIRVGNWYEVTKENDTA
VLKHMVEREYRADPVVMAYDIETEKAPLRFPDSAVDRIMMISYMIDGEGFLITNREMVSE
DIEDFEYTPKPEFPGNFTIFNEPNEKAVLEKWFEHIRDVCPTVMTSYNGDFFDFPFIDKR
TAFHGMNLYDEIGWKKVEEERYECSYCVHMDCLNWVKRDSYLPQGSQGLKAVTKVKLSYD
PKELDPEKMTPYARDHPQILAEYSVSDAVATYYLYMKYVHPFIFSLCCIIPLNPDAVLRK
GTGTLCEMLLMVKAYEGRIILPDKHKPALERHYKGHLVDNETYTGGHVESLAAGVFRSDI
MVDFDIDTNSIDELLVNLDETLEFCVTVEAGKKSSDFENLDEVRDQIIEQLQELKSNPKR
SDYPLIYHVDVASMYPNIMTTNRLQPDSMVDEKDCAVCDYNRPDKTCARELEWARRVDYY
PVSKGDVNNLKQGLVEEYSGGRFGNGSSVEISYDEGMTEREKFQKRKGWAGLSGQEQANK
LKERVAAFSLKTKARKTDSETTVQKTIVCQRENPFYVDVVQEFKQRRIDYKTKAKRWNKE
AASASDPASREEAKKMAITNDSMQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCYTGAK
IIKIARQTMEGLGIPLELDTDGIWCMLPKTFPEKFKCKFKDGSSYELEYPCSIMNYLVHR
DFTNHQYQKLNPETGKYDTHSENSIFFELDGPYKCMMMPTSTDKGKGLKKRYVVFDDRNK
IVELKGFEVKRRGELSLIKKFQSQLWDTFLEGSNLVECYAAQARVAEAWLAVIDSRGKNL
SDEELIDLVCENKSMSKPVHEYGSQKSTALTTARRLAEIMGDSILTGGKLSTKYIIAVRT
KNSMPVPEAKKGSDEDSSTADRAIPTLVFETESLDEKLRFLKRWMGPRWESTDPRDVIDW
MYYRERLATTINKLVVIPAILLGLKNPVRGCDPPEWASDIIKQRDNPIKQSTLSSYFVKG
KLPTPEPILSEEDEVMEIQVGDIESIGTTPSPSRPPGVPARVVVSKRVRKTVEETDKSTP
SLPHKAPDPFADYAAYIKYAKVKWKHQKAQRDRRAHLFGESDNGIASSWVSKNAHLAQDA
WHLVSIHAAEKPGQVEASVIIGDKMQRVQINVPRKVYVGSREPLKWDKFTDVTNAMAVAE
EEQPKYLYRAVMSEDMYQTEMTNPESPLKDPHVTKIYEADVSPDSRALIELGSTFHLDAS
TPGILSKGFTHGFEAKWFKSGDSRSYLQNSGLSYAHIVHVVSSAVEIFVITPTWDAPALV
FVHQSSSSEKLPDISKEYARLRRGERYKQNMDDCTVFSFPDTMQYEVEYCSNHRRMLQKV
SKACDSLSGSRNGQLVFALHSPDRNVDEKVAALARIPCIRLRPVPPSTAAVGWQRDLVRR
LIASFLSHGANISYLVEMARYAKMPLCHVQDTRDVIDVSYARRLIQNSVVLWWSAALSTG
GALTDQAEVPVANNPGLYTNICFEIKIEHLVLNALLQSAVIQDTEGDIHNELLSNAFNPH
ALKTLKMVVKEWWEHGDKKRPPQDLLDNFTVWVYAPESRLFSPQLLYHTQNLTKKTFLYL
AQECRKHQAQLVYADQHKLVLQTEKTELQLVYSYSNYIVRQIRTHPILKYVSVDITRYWD
TFLWMDKWNYGGYSSDVIVDPSKQSESLLMHWHIANFLPETLQQEFSKWVQEYIHLLRLR
KYPENRTTDVDDMPSDTPMLTDGDKDDAALLSDKFFGKGVVSYLHPKLVRRVKLLAQKLS
DVLSSGDSIDAFKFPVLPGSMIQPETNPVVEFAKYVCHIYGINAKANFEVQILLRDLLNI
FDINEFSEEGTFRDPSMSLKLTNMMCFKCKNPCDLDLCKDSCCTKSGFRCPLCNSLYDMV
IVEQRLVGQLQRMILEYETQDFRCDKCRRVKEYELTEFCPCSGSWVTIMSAEDVHKELSI
YDRCARWFELKMLGSFLRQLGYV
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaccttttaacggaaacaacacccatgtggtgaaacagcgcagtgacgagttt
gagcggcgaaggctggagcggatcgagcagctgggtcaaaagtttgccgcagtcgaacgc
cgagatgccatagacgaccgaatgggttttactcgcttctctggcgatgaaaaacgagtc
gggtggctggtcaacatgcacgagacgttgctacagtcggaaacggccgagcggggcctg
gcagcggtggactactacttctacgacgaggagggaggcaacttcaagtcgacggtggtg
ttccggccctacttttttgtcatttgcaagcctcatactgagcatgcggtgaaggatctc
atggaaaagatgtttgagcgggtgctcgcaagcacggaaattgttacaaaggaagatttg
aacttgacaaaccatctcacaggaaagaaacgaaaggcggtgaaattggaatttcacaac
tcggaggatctgagctcgacacgtttcacgctcagcaagattgtcgaccgacagacacag
cagacagagcagcatctcaacatttatgagcttgaaggcgatgtggacaccagcacagac
gtagaatcatccatcactggcatcaaggaatttgatgtgccgtttgaaacccgagtggcc
attgatctggacattcgtgtgggaaactggtacgaggtcaccaaggaaaacgacacggct
gtgctcaaacacatggttgaacgagagtaccgagccgatccagtcgtcatggcatacgac
attgagaccgaaaaggctccccttcgtttccccgactcagccgtcgacagaatcatgatg
atttcgtacatgattgacggcgagggtttcctcatcaccaaccgagaaatggtgagtgaa
gacattgaggactttgagtacactcccaagcccgaattccccggtaatttcaccattttc
aacgagcctaacgagaaggctgtgttggaaaagtggtttgagcacattcgagacgtgtgt
cccacggtgatgacttcctacaacggagactttttcgacttcccattcatcgacaaacga
acagccttccatggaatgaatctctacgacgagattggatggaaaaaggtggaggaagag
agatacgagtgttcctattgtgtgcatatggactgtctcaactgggtcaagcgagactcg
tacttgcctcagggttctcagggtctcaaggctgtgacaaaggtgaagctgagttacgat
cccaaggagctcgatccggaaaagatgactccttatgcacgagaccatcctcagattctc
gcggaatattctgtttccgatgctgtggccacctattatctctacatgaagtatgtgcat
ccgttcatcttctctctgtgttgcattattcccctcaaccccgatgcagtgctacgaaaa
ggtacaggtactctttgcgagatgctcctcatggtcaaggcttatgagggacgcatcatt
cttcccgacaagcacaaacctgctcttgagcgtcattacaagggtcatctggtcgataac
gagacgtacaccggtggccacgtggagtccttggctgctggcgtgtttcgaagcgacatc
atggtcgatttcgacattgatactaacagtatcgacgagctactggtcaatttagacgag
actctcgagttttgcgtcactgttgaggctggaaagaaatcgtctgattttgagaacttg
gatgaagtaagagaccagatcatcgaacagcttcaggagctcaaatccaaccccaagcga
tccgattacccgctcatttaccacgtggatgtcgcgtctatgtaccccaacatcatgacg
accaaccgacttcagcccgactccatggtagacgaaaaggactgtgctgtttgtgactac
aaccgtcccgacaagacgtgcgcacgtgaactagagtgggctcgacgagtcgactattac
cctgtgtcaaagggagatgtcaacaacctaaagcagggtctggttgaggagtactccgga
ggtcgtttcggaaacggctcatctgtcgagatctcgtacgatgaaggtatgactgagcgg
gaaaagttccagaaacgaaagggctgggctggattgtctggtcaggagcaggctaacaag
ctcaaggagcgagtggcggccttttcgctcaagaccaaggctcgaaagacggactcggag
acgactgtgcaaaagaccattgtttgccagcgagaaaaccccttctatgtcgatgttgtg
caagagttcaaacagcgtcgaatcgactacaagacaaaggcgaaaaggtggaacaaggag
gctgcttctgcttccgatcctgcgtctcgagaggaggccaagaagatggctatcaccaac
gactcgatgcagctggcccacaaagtcattctcaactccttctacggttatgttatgcga
aagggttctcgatggtactccatggagatggccggtgtgacttgttacactggagccaag
atcatcaagattgcccgtcagacaatggaaggtcttggtattcctcttgagctcgataca
gacggtatttggtgtatgctgcccaagaccttccccgagaagttcaagtgcaagtttaag
gatggttccagctacgagcttgagtatccctgttctatcatgaactacttggtgcacaga
gactttaccaaccaccagtaccagaagctgaatcccgagactgggaagtacgacactcat
tcagaaaactccatcttcttcgagctcgacggaccctacaagtgcatgatgatgcctacg
tcgactgataagggtaagggtctcaaaaagcggtacgtggtttttgacgaccgcaataag
attgtcgagcttaagggcttcgaggtcaagcgacgaggagagctgtcgttgatcaaaaag
tttcagtcacagctgtgggacacgtttctggagggctccaatctcgtcgagtgttatgct
gctcaggctcgagtggctgaagcttggctggcagtgattgactctcgcggcaagaaccta
tccgacgaagagctcattgacctggtttgtgagaacaagtccatgtccaagcctgtgcat
gagtacggctctcagaagagtactgctctgacgactgcccgtcgtctagcggagattatg
ggcgactccattctcacgggaggcaagctgtcaaccaagtacatcattgcggttcgaacc
aagaactccatgcctgttcctgaggctaagaagggttccgacgaggactcttcaactgct
gatcgagctattcccactctggttttcgaaaccgaatctctggacgaaaagctgcggttc
ttgaaacggtggatgggccctcgatgggaatccacggacccccgagacgtcattgactgg
atgtactatcgagaacgtctggcgacgactatcaacaagcttgtggtgattcctgccatt
ctgttgggtctcaagaaccccgttcgaggctgtgatccccccgaatgggcttctgacatc
atcaagcaacgagataaccccatcaagcagagcaccctgagctcttattttgtcaagggt
aaacttcccactcctgagcccattctcagtgaagaagatgaggtcatggagatccaggtg
ggcgacattgaaagcatcgggaccactccttctccttccagaccccctggagtgcctgcc
cgagtggttgtgtctaaacgagtgcgcaaaactgttgaggaaacggacaagtccactccc
tctcttcctcacaaggcccccgatccgttcgccgactatgcagcctacattaagtacgcc
aaggtcaagtggaagcatcagaaggctcagcgagaccgaagagcccatctttttggcgag
tccgacaatggcatcgcttcttcgtgggtgtccaagaacgcccacctggctcaagacgcc
tggcacctggtgtccatccatgctgccgaaaaacctggccaggtggaggccagcgtcatc
atcggagacaagatgcaacgggtgcagatcaatgtgccgcgcaaggtgtacgtggggtct
cgtgagccgctgaagtgggataagttcactgacgtgaccaatgccatggctgtggctgaa
gaggagcaacccaagtacctctaccgagcagtcatgtctgaagacatgtaccagacggag
atgactaacccggagtctccgctgaaggaccctcacgtgacgaaaatctacgaggccgac
gtgtcgcctgattcacgtgccctcattgagcttggatccacattccatcttgatgcctcc
actcctggtatcctctccaagggcttcacccatggctttgaggccaaatggttcaagtca
ggtgactcgcggtcctacctgcaaaactcaggactctcctacgctcacattgtgcacgtg
gtttcttctgccgtggagatatttgtcatcacacccacctgggacgcaccagctcttgtg
tttgtgcaccagtcgtcttccagtgaaaagttacctgacatctcgaaggagtacgcccgt
ctgcgacgtggagaacggtacaagcagaacatggacgattgcaccgtcttttccttcccc
gacacaatgcagtacgaggtggagtactgttccaaccaccgacgaatgctgcagaaggtg
tccaaggcgtgtgactcactgtctggctcccgaaacggccagctggtgtttgcactccat
tctccggacagaaacgtggatgaaaaggtggctgccctggccagaatcccctgtattcgg
ctgagacccgttcctccgtctactgctgctgttggatggcaacgggatctggttcgacgg
ctgattgcatcgttcttgtcacatggagccaacatttcgtaccttgtcgagatggctcgg
tatgccaagatgcctctgtgtcatgtgcaagatacccgggacgtgattgacgtatcatac
gctcgtcggctcatccagaacagtgtcgttttgtggtggtctgctgctctgtctaccgga
ggagccctcactgaccaggcggaagtgcctgtcgccaacaatcctggactgtacaccaac
atttgtttcgagatcaaaatcgagcatttggtgctcaacgccttgttgcagagtgctgtg
atccaggatactgagggagacattcacaacgagcttctctccaacgccttcaacccccac
gccctcaaaaccctcaaaatggtggtcaaggagtggtgggagcacggggacaagaaacgg
cctccccaggatctgctggacaacttcacagtgtgggtttatgcgcctgagtcgcgtctt
ttctccccccagttgctgtaccacactcagaacctgacgaagaagaccttcctgtatctt
gctcaagagtgtcgaaagcaccaggctcagttggtgtacgctgatcaacacaagcttgtg
ttgcagacagagaagacggagcttcagctggtgtactcgtactccaactacattgttcgg
cagatcagaacccatcccattctcaagtatgtctctgtcgacattactcgctactgggac
accttcctgtggatggacaagtggaactacgggggctactcgtctgacgtcattgttgac
ccctccaagcagagcgagtctctgttgatgcattggcacattgccaacttcttgcctgag
actctacagcaggaattttccaagtgggtccaggagtacattcatttgttgcggctgcgg
aaataccccgaaaacagaactactgatgttgacgacatgcccagtgacactcccatgctc
accgacggagacaaggacgacgctgcccttctgagcgacaagttctttggcaagggtgtg
gtttcttacctgcatcccaagctcgtgagacgggtcaagctgctggctcaaaagctatcg
gatgttctctcctcaggcgactccattgacgcctttaagttccccgtgcttcccgggtcc
atgatccagccagagactaatcccgtggtcgagttcgccaagtacgtgtgccacatttac
ggcatcaacgccaaggccaactttgaagtccagattttgctcagagaccttcttaacatc
tttgatatcaacgagttttccgaggagggcacgttccgagatccgtccatgtcgctcaag
ctaaccaacatgatgtgtttcaagtgcaagaacccctgcgatctggacctatgcaaggac
tcgtgctgcaccaaatctggcttcagatgccccctctgcaactcgctctatgatatggtc
attgtggagcagcggctggtgggtcagctgcagcgaatgattctcgagtacgagacgcag
gacttccgctgcgacaagtgtcgacgagtcaaagagtatgagctcacggagttctgtcct
tgttctggctcttgggtcactatcatgtctgccgaagacgtccacaaggagctgtccatt
tatgatcggtgcgctcggtggttcgagttgaagatgcttggttcgttcctcagacagttg
ggttatgtttag
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integrated database retrieval system
