Yarrowia lipolytica: 2912393
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Entry
2912393 CDS
T01033
Symbol
YALI2_E01633g
Name
(RefSeq) General negative regulator of transcription subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2912393 (YALI2_E01633g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912393 (YALI2_E01633g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2912393 (YALI2_E01633g)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
2912393 (YALI2_E01633g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Nnf1
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
2912393
NCBI-ProteinID:
XP_503626
UniProt:
A0A1D8NHD2
Q6C6T6
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Position
E:complement(858783..860663)
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AA seq
626 aa
AA seq
DB search
MAARKLQQEMDRVFKRVAEGVATFDSIYDKVQQSTNQSQKEKLEQDLKREIKKLQRLRDQ
IKTWMGSNDIKDKKTLTDQRKLIETEMERFKACEREMKTKAFSKEGLSPGAGKQLDPREQ
QRQEACAFVQNTIDELSEQLETLEAEEEQLHGTVRKGRKDNSVKSERLSEIADASDRHKW
HIGRLEVIARLLENGSLAPQQVMDLQEDIQYYVESNQDVDFAEDVEIYDELNLDQEEDEF
TIDEQYLRDEPTSTLEDLAVESAKEREREAAKEKEEAAKAAQAQKEAAAQAAADAQNSSR
RPAATNTPPPIGSNMKPAPLPTRNESLKYASAAAAAAGSSVGSSPSALPQGLAPLPAPKE
EIRAAAPVPVAVSATPAPWAEGGGPAPGGANVSIPTGPAAASTPIAASSTPVAAPAIPTG
PAASATIASTSSAGNTTSTAPSPPPLSTSTTLSDDSIIYTLPPGLQDLVSSLDVAKKRVG
TPPPIGSIAKLLETSYFSCPDSGDAEKPQMYHPESPFPTLPFYPQDPLAVFEDGGIFAKM
DIDTLFYIFYYRQGTYHQYLAAKELKSRSWRFHKRFLTWFQRHEEPKMINNEFEQGTYRY
FDFEGVWLQRRKSNFQFEYHFLEDEI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgaaaactgcagcaggaaatggaccgagtgttcaagcgggtggccgaagga
gtggccacctttgactccatctacgacaaagtacagcagtcgaccaaccagtcgcaaaag
gaaaaactggagcaggatctcaagcgagagatcaaaaagctgcagcgattacgagaccag
atcaagacatggatgggttccaacgacatcaaggacaagaagacgctgacggaccaacgc
aagctgatcgagacggaaatggaacggttcaaggcctgtgagcgggagatgaagaccaag
gcattttcaaaggagggactgagtccaggcgcaggcaagcagcttgatccgcgagaacag
caacgacaggaggcgtgtgcgtttgtgcaaaacacgatcgacgagctgagtgagcaattg
gagaccttggaggccgaggaggagcaattgcacggcacggttcgaaagggtcggaaggac
aacagtgtcaagagtgagcgtcttagtgagattgctgatgctagcgatcgacacaagtgg
cacattggacgtctagaagtcattgcacgactgcttgagaatggatctttggctcctcaa
caggtgatggatcttcaggaagacattcagtactacgtggagtccaaccaggatgtggat
ttcgccgaggacgtggaaatctacgatgagctgaatctggatcaagaggaggacgagttc
accatcgacgagcagtacctgagggacgagcccacgtcgacgctggaagatttggctgtg
gaaagtgccaaggaacgagaacgagaagccgccaaggagaaggaggaggcggccaaggcg
gcccaggcacaaaaggaggcggcagcacaagcagcggcagacgctcagaatagcagtcgc
cgtccggcagccacaaacacgcctcctccgatcggaagcaacatgaaacctgctcctctg
ccgacccgcaatgagtcgctcaagtacgcctctgcagccgccgctgctgctggaagcagt
gtgggaagctctccgagtgcattgccacagggcctagctcccttgccagctcccaaagaa
gaaattcgagccgctgcgcctgtgcctgtggccgtttctgccactcctgctccctgggct
gaaggaggaggtcctgcacctggaggagccaacgtatctattcctaccggccctgccgct
gcttcgactcccattgccgcttcctctacaccggtggctgctcctgctattcctactggc
ccggctgcctctgccaccatagcctcgacaagcagcgcaggcaacaccacatcgacagca
ccttcgccgcctcccctgtccacgtccaccactctgtcggacgactctatcatctacacg
cttcctcccggcctgcaagaccttgtgtcgtcgctggacgtggccaagaagcgagtcggc
actcctccaccaataggctcgattgccaagttgctggagacgtcgtacttttcgtgtcca
gactcaggcgacgcggagaagccgcaaatgtaccatcctgagtcgcctttccctactctg
ccattctatcctcaagaccctctggcggtgtttgaggacggcggcatttttgcgaaaatg
gacatcgatacgctattctacattttctactaccgccagggaacgtaccatcagtatctg
gcggccaaggaactcaagtcgcggtcgtggcggttccacaagcggttcctgacgtggttc
cagcgccacgaggagcccaagatgatcaataacgagtttgagcagggcacctaccgctac
tttgactttgagggtgtgtggctgcagcgacgcaagtccaacttccagtttgagtaccat
tttctggaagatgagatttag
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