Yarrowia lipolytica: 2912670
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Entry
2912670 CDS
T01033
Symbol
YALI2_E01257g
Name
(RefSeq) Histone deacetylase HDA1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
yli01009
]
2912670 (YALI2_E01257g)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2912670 (YALI2_E01257g)
04131 Membrane trafficking [BR:
yli04131
]
2912670 (YALI2_E01257g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2912670 (YALI2_E01257g)
Enzymes [BR:
yli01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
2912670 (YALI2_E01257g)
Protein phosphatases and associated proteins [BR:
yli01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
2912670 (YALI2_E01257g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
2912670 (YALI2_E01257g)
Membrane trafficking [BR:
yli04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
2912670 (YALI2_E01257g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
2912670 (YALI2_E01257g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Motif
Other DBs
NCBI-GeneID:
2912670
NCBI-ProteinID:
XP_504372
UniProt:
A0A1D8NJW4
Q6C4P0
LinkDB
All DBs
Position
E:complement(3070213..3072990)
Genome browser
AA seq
925 aa
AA seq
DB search
MDSDRDIKDAGERAAAVETNVGEITAPDTSEKPLPGAETAADEPSVSIEQKAEPGAKIEE
DHKNGVEGKDEKKEENEQEVVKAEDKTDEKPEVTANDKIDEINEAPASTDVKTEAVVEPT
THDTNAATSTTGTGTTDTTATTTTATNTNEHDLQAMHDTGAVADGDLMDTSDDYKINMDQ
VQLGDYDSASISGQIAERMAQPIKTEFDTNFVPQTLSLVDLEHVNGKRKFEETDTPEFDT
QRARELILDADVNPALKAPQLRYIPLKTGVCYDVRMRYHARLVSTSYDYVDPHPEDPRRI
FSVYKALVDAGLVVDPEYLGLEDIGPLMEKIPIREASLDEVLEVHTPAHVDFLASTEKMN
RPQLLEEGEKGDSVYFNNESFSAGKLSCGGTIETCRAVIERNVKNAIAVVRPPGHHAEPG
NPAGFCMFSNVAVAAKVLLKRYPERVKRILILDWDVHHGNGTQRAFLDDPRVLYISLHQY
ENGKFYPGGTFGAHTSVGTGAGEGYSVNIPWSAPGAGDADYIYAFQKVVMPIGMEFDPDF
VIVSAGFDAAEGDLLGGCKITPSGYGHMTHMLKGLASGNLAVVLEGGYTLEATAKSALAV
TKVLLGEAPLPLPAAFKPTSATISVVQDVVETQSQYWRCLQPGFETIIPKEITTYDLMGD
VVRSYQARKLFDKYKLSALPNMGGSSSTPSGRAATAGPASGSSISLADQILASPKIHSAE
TVVVFVHDPPQIWGKVDAVTGELDFDSCMVDVTTKWLEWAHGRGYGIIDVNIPKALNGAD
DDNYYALFASQEVCLYLWDKYLSVFDAQNVIMVGFGDAYAGLVHLVGHRDTREKVNCVIN
FISETQLRPIVSIIDEYITDWFYRSSLVFTADTHPCWDVSTNPKKPRRKFGRVLRCDSTG
LHRIVEERFKEAVEFIDEQLEDDEE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgatcgggatatcaaggacgcgggggagcgtgcagcggccgtcgagaccaat
gttggtgagattaccgcgcccgacacgtctgaaaaaccgcttccgggggctgaaacagct
gctgatgagccctctgtttcgattgaacaaaaagctgaacctggtgctaagattgaagag
gatcacaagaacggagttgaagggaaggatgagaagaaggaggagaatgagcaagaggta
gtcaaagcagaggataagaccgacgagaagcccgaagtgactgccaacgataaaatcgat
gagataaatgaggctcctgctagcaccgacgtcaagactgaagccgtcgtcgaacccacc
acacacgacacgaacgccgcaactagcacgaccggaacgggcacaaccgacactacagca
accaccactacagcaaccaacacgaacgaacacgacctacaggcgatgcacgacactggt
gcggtggccgatggcgatttgatggacacgtcggacgactataaaatcaacatggatcag
gtgcagctaggggactatgacagcgcttccatctccggccagattgctgagcgaatggcg
cagcccatcaagacggagttcgataccaactttgtgccccagactctgtcgctggtggac
ctggagcacgtcaacggcaagcgtaagtttgaggagacagacacgcctgaattcgacaca
caacgcgcccgtgaactcatcctcgacgcagacgtcaacccagccctcaaggctcctcag
ctgcgttacattccgctgaaaactggagtctgttacgacgtgcgaatgcgataccatgct
cgtctggtgtccacatcctacgactacgtggaccctcatccagaggacccgagacgtatt
ttctcagtgtacaaggcgctggtggatgcaggactagtggtggatcccgagtatctaggt
ctggaggacattggcccactgatggaaaagattccgatccgagaagcctcgctcgacgag
gttctggaggtgcatacccccgcacatgtggacttcctagcgtcgacggagaagatgaac
cgaccgcagttactggaggagggcgaaaagggcgactcggtctatttcaacaatgagtcg
ttcagtgcaggcaaattgtcctgtggaggaaccattgagacgtgtagagccgtgatcgag
cggaatgtcaagaacgccattgccgtcgttcgtccaccaggccatcacgccgagcctggc
aaccctgctggcttttgcatgttttccaacgtggctgtggctgccaaggtgctactgaaa
cggtaccctgagcgagttaagcggatcctgattctcgactgggatgttcatcacggaaac
ggtacccaacgagcctttctggatgaccctagggtgctttacatttctctgcaccagtac
gagaacggaaaattctaccctggaggcacatttggagctcacacgtctgtgggaactgga
gctggagagggatacagtgtcaacattccctggagtgcccctggagctggcgatgcagac
tacatttacgcattccaaaaagtcgtcatgccaattggtatggagtttgaccctgatttt
gtgattgtgtcagctggtttcgacgcagccgagggtgatcttcttggtgggtgcaagatt
acgccttcgggatatggtcacatgacccacatgctcaagggcctggcttctggaaacctg
gctgtggtgctggagggaggttacactttggaggccactgccaagtctgccttggccgtc
accaaggtgcttcttggagaggcgcctcttcctcttcctgcggccttcaagcccacctct
gcaactatctctgttgtccaggatgtggtcgagacccagtctcagtactggcgatgtctg
cagcctggctttgagactatcattcccaaggagatcaccacgtacgatctgatgggtgac
gtcgttcgatcctaccaggcacgcaagctgttcgacaagtacaagctatcggctcttcca
aacatgggaggaagcagcagtacgccatctggacgggctgccactgctggtcctgcttca
ggatcgtcaatctctctggcagaccagattcttgcatcaccaaaaatccactcggccgaa
accgtggttgtgtttgtgcatgatcctcctcagatctggggtaaggtggacgctgtcact
ggcgagcttgactttgattcctgcatggttgacgtgacgacaaagtggctggagtgggca
catggacggggatacggtatcattgacgtcaacattcccaaggctttgaatggagctgac
gacgacaactactatgcactgtttgccagccaggaggtgtgcctgtatctgtgggacaag
tacctcagtgtgtttgacgcgcagaacgtgatcatggtgggctttggtgatgcctacgct
ggtctggtgcatctggtaggccaccgagacacccgagaaaaggtcaactgcgtcatcaac
ttcatctccgagacccagctgcgccctattgtctccattattgacgagtacatcaccgac
tggttctaccgatcgtcactggttttcactgcggacacccatccctgctgggatgtgagc
actaaccccaagaagccaaggcgtaagtttggacgagtgctccgatgtgacagcaccggt
ctacatcgaattgtggaggaacggttcaaggaagcagttgagttcattgacgagcagctg
gaggatgatgaggagtag
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