Yarrowia lipolytica: 2912677
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Entry
2912677 CDS
T01033
Symbol
YALI2_E01289g
Name
(RefSeq) RNA-binding protein rsd1
KO
K13091
RNA-binding protein 23/39
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yli03041
]
2912677 (YALI2_E01289g)
Spliceosome [BR:
yli03041
]
Common components
Common spliceosomal components
General mRNP proteins
2912677 (YALI2_E01289g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
2912677
NCBI-ProteinID:
XP_504318
UniProt:
Q6C4U4
A0A1H6PPZ3
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All DBs
Position
E:complement(join(2895806..2895860,2895914..2896141,2896192..2898053))
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AA seq
714 aa
AA seq
DB search
MSPNVPQLPSEQVSTNLPLDSPNGVDGRDSGFSSGVSSGKDPSTSSGTNSGSNCETSSGS
GSGSNSANEGSANEGSKPETKSALRTKKDAATAQTSAKRSLSDTLPKQVETVAPRSSSNS
KYRKLDEMFSNEEAKWNGETPPVSLSNTPSDKFLSPPASEMTTNATSSRDTRRRYRSKSP
QRPKEDLRRDDHTNRQSSREEPSAQRRHSNHNRNSYYPGYSRDARDRDSRDRDRDRDRDR
DSRDQRDRDNFEWKQFRDRDRDRDRDYRNTNGWERYRPDWVQEWDTYRNRDSERARARYR
RWETEHERNYERRGPISKNHELSAEDRDKRTVYVQQVAPHVQSTELFDFFAEAGPVHDVS
LVKDRSSRCRGVAFVEFEDVESVSRAIGLTGRSLHGQALLIRCTDSARNREEQQSEASFN
SSGAGSTHAVANVNASTSAIDSVRFHRLYVGNIYFGVTEGEIIQIFEAFGPIEFADLQKE
KTGKSKGYCFIQYVNPDDAKTALEKMNGFELAGRKLRVGLGLGERGATKARKILTEIGLL
AADGVSRSADQVATQIAVDRQNQKLKLKDQRNQQRELEQREIELRGTSHVKSELDGHKQY
QGSVEFTSKCALLRNMFNYSEETGNWVEELKEDVRLECEEKFGPVESISLEVEKGEILLR
FHNEIDCVKAVNNLHQRYFGGRVINASHISEQDFEMKPSIPQSPATDREEVAAP
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaaatgtgccgcagcttccgtctgaacaggtgtcgaccaacctcccgctagac
tcgcccaatggcgtagacggccgagactcggggttctcgtccggagtgtcgtccggcaaa
gaccccagcaccagctcgggcaccaactcgggctccaactgcgaaacgtcatcgggctcg
ggctcgggctccaactccgccaacgagggctcggccaatgagggctccaaacccgaaacc
aagtctgcgctcagaactaagaaggacgccgccaccgcccagacctccgccaaacgctcc
ctctcagacacgctccccaagcaggtggagacggtggcgcctcgatcgagctccaactca
aagtaccgcaagcttgacgaaatgttctccaacgaagaggcaaagtggaacggcgagact
cctcccgtttctctgtccaacaccccctccgacaagttcctctcgcctcctgcaagcgaa
atgaccaccaacgctacctcgtccagagacacccgacgacgataccggtcaaagtcgccg
cagagacccaaggaggacttgcgacgagacgaccacaccaaccgccagtcgtcccgagag
gaaccctctgcccagcgtcgccacagcaaccacaaccgcaattcctactaccccggctac
tcaagggatgcacgagaccgtgactcccgagaccgagaccgagaccgtgaccgtgaccgt
gactccagggaccaaagagaccgagacaacttcgaatggaaacagtttcgagaccgtgac
cgtgaccgtgaccgtgactaccgcaacacaaacgggtgggagcgctacagacctgactgg
gtacaggaatgggacacataccgcaaccgggacagcgagagagcgcgggcccggtaccgt
cgatgggagacggagcatgagcgcaactacgagcgccgaggccccatctccaagaaccac
gagctgtctgccgaagacagagacaagcgaactgtttacgttcagcaggtggccccccac
gtgcagtcgaccgagctgtttgacttctttgcagaagccggccccgtgcatgacgtgtcg
ctcgtcaaggaccgcagcagtagatgccggggtgttgcatttgtggagtttgaggacgtg
gagtctgtctcccgcgccatcggactcacaggccggtctcttcatggccaggctcttctt
attcggtgcactgacagtgctcgaaaccgagaggagcagcagtccgaggcatctttcaac
agctctggtgcaggcagtacccatgccgtggccaatgtgaacgcatccacatctgccatt
gacagtgttcggttccaccgtctctatgtcggcaatatttattttggtgtcacagagggc
gaaatcattcagatcttcgaggcctttggacccatcgagtttgccgacctccaaaaggag
aagacgggtaagtccaagggctactgcttcatccagtacgtcaatcctgatgatgccaag
actgctcttgagaagatgaacggctttgagcttgctggtcgcaagctcagagtcggtctc
gggctgggagaacgtggggccaccaaggcccgcaagatcctcaccgagattggtcttctg
gctgcagacggtgtgtctcgctctgcagaccaggtcgccacccagattgcagtcgaccgt
cagaaccagaagctcaagctcaaggaccagcgtaaccagcagcgcgaactcgaacaacgt
gaaatcgagttgcgaggcacctcacacgtcaaatctgaactcgatggccacaagcagtac
caggggtctgtggagttcacctccaagtgtgcccttctacgaaacatgttcaactacagc
gaggagaccggaaactgggttgaagagctcaaagaagatgtccgcctcgagtgtgaggaa
aagtttggccctgtagagtccatctcgttggaagtggaaaagggagagatcctgctccgg
ttccacaatgagattgactgtgtcaaggcggtcaacaacctgcaccagcgatatttcgga
ggccgtgtcatcaacgcctctcatatttcagagcaagattttgaaatgaaaccctccatt
ccacagtcacccgccacagatcgggaggaagttgctgctccttag
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