Yarrowia lipolytica: YALI0B15642g
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Entry
YALI0B15642g CDS
T01033
Name
(RefSeq) YALI0B15642p
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YALI0B15642g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yli03041
]
YALI0B15642g
03009 Ribosome biogenesis [BR:
yli03009
]
YALI0B15642g
Enzymes [BR:
yli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
YALI0B15642g
Spliceosome [BR:
yli03041
]
Complex A
U2 snRNP components
U2 related factors
YALI0B15642g
Complex B
YALI0B15642g
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
YALI0B15642g
Ribosome biogenesis [BR:
yli03009
]
Eukaryotic type
90S particles
Helicases
YALI0B15642g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
2906967
NCBI-ProteinID:
XP_500940
UniProt:
Q6CEH2
LinkDB
All DBs
Position
B:complement(2072370..2074565)
Genome browser
AA seq
731 aa
AA seq
DB search
MEPVSKKPKTDEEEIVEDYEVEEYVPDNTLVELASGLTRLQTTADEGMKHEDGPNNMFNG
KELSTKYFDILKVRRDLPVHVQRQQFLDTFHSTQIMVFVGETGSGKTTQIPQFVLFDDLP
QLQGKMVACTQPRRVAAMSVAKRVADEMDVRLGEEVGYSIRFEDKTSPKTLLKYMTDGML
LREAMHDHNLSRYSCIILDEAHERTLATDILMGLIKQVAVRRPDLKIIVMSATLDAQKFQ
SYFNDAPLLAVPGRTHPVEIYYTPEFQRDYLESALRTVLQIHATEPEGDILLFLTGEEEI
EDACRKLKLESDELTRESGCGPLKAYPLYGSLPPNQQQKIFDDAPPGGRKVIVSTNIAET
SLTIDGIVYVVDTGFSKQKVYNPRIRVESLLVAPISKASAQQRAGRAGRTRPGKCFRLYT
EDAFKKELNEQSYPEILRSNLASTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYL
TCLDDDGNLTELGRLASEFPLDPMLAVMLISSPDYYCSNEILSLTALLSVPNVFVRPNND
RKAADEAKNSFAHPDGDHLTLLNVYHAYRSDEAQADPNEWCYQNYLSLRSLQSADNVRAQ
LKRLMEKNGLELMSTPYEDRNYYTNIRKALTAGYFMQVAKKSSQGGKNSYTTVKDNQDVL
IHPSSVLGQDSEWVIYNEFVLTTKNYIRTVTGIRPEWLLEIAPVYYDLDTFRKGDIKMSL
ERVYKKLEAKK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgtgagcaaaaagcccaagactgacgaagaggaaatcgtcgaagactatgag
gttgaggagtatgttcccgacaacaccctcgttgagttggcgtctggactgacccgactc
cagaccacagccgatgaaggcatgaagcacgaagatggacctaacaacatgttcaacgga
aaggagctgtcgacaaagtatttcgatatccttaaggtccgacgagacttgcccgtccat
gttcagcgacaacagttcctcgataccttccactctactcagatcatggtgttcgttggt
gagactggatctggtaagactacccagatccctcagtttgtgttgtttgatgatctccct
cagctgcaaggtaagatggttgcctgtacgcagccccgtcgagttgcagccatgtctgtt
gccaagcgtgtggctgatgagatggatgtgagacttggcgaggaagttggttactccatt
cgattcgaggataagaccagccccaagactcttctcaagtacatgactgatggtatgctt
ctgcgagaggccatgcacgaccacaacctgtctagatactcatgcattattctcgatgag
gcccacgaacgtactctggctacagatatcctcatgggtctgatcaagcaagtagctgtc
cgacggcccgatcttaagatcattgtcatgtccgccacactggacgcccagaagtttcag
tcgtacttcaacgacgctcctctcctggctgttcccggtcgaacccaccccgtcgagatc
tactacactcccgagtttcagcgagactaccttgagagtgctcttcgaactgttctccag
atccatgccaccgagcccgaaggagatattctgctattcttaaccggtgaggaggaaatt
gaagacgcttgccgaaagctcaagctcgagtccgacgagctcacccgtgagtctggctgt
ggtcctcttaaggcctaccccctgtacggctctctgccccccaaccaacagcagaagatt
ttcgacgacgctcctcctggaggacgaaaggttattgtctccaccaacattgctgaaact
tcgcttaccattgacggtattgtatacgtcgtcgacaccggcttctccaagcagaaggtg
tacaaccctcgaatccgagttgagtctctgcttgtggctcccatctcaaaggcgtctgcc
cagcagcgagctggccgagctggccgaacccgacctggtaagtgtttccgactctacacc
gaggatgccttcaagaaggaactcaacgagcaatcctaccccgagattctgcgatccaat
cttgccagcactgttctggagctcaagaagctgggcattgacgatctcgttcactttgac
ttcatggatccccctgctcccgaaactatgatgcgagctctggaagaactcaactacttg
acttgtcttgacgacgatggaaacctcaccgagctcggtcgacttgcttccgagttcccc
ctggaccccatgctggccgtaatgctcatctcctcacctgactactactgctccaacgag
attctgtctttgactgctcttctgtccgtgcccaacgtgtttgttcgacccaacaacgac
cgaaaggctgccgacgaggccaagaacagctttgctcatcccgacggtgaccatctaact
ttgctgaacgtctaccacgcatacagatctgacgaagcccaggctgaccccaacgaatgg
tgctaccagaactatctgtctctgcgatctctgcagtctgccgacaacgtgcgagctcag
ctcaagcgactgatggagaagaatggactggagctcatgtccactccctacgaggaccga
aactactacactaacatcagaaaggctcttactgccggatacttcatgcaagtggccaag
aagagttctcagggaggcaagaactcttacaccaccgttaaggacaaccaggacgtgttg
atccacccctcttcggtgcttggccaggactccgagtgggtgatttataacgagttcgtt
ctaaccactaagaactacattcgaaccgtcactggcattcgaccggagtggctattggag
attgctcctgtctactacgatctggacaccttccgaaagggcgacatcaagatgtctctc
gagcgagtgtacaagaagctggaggcgaagaaatag
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