Yersinia massiliensis: DA391_01355
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Entry
DA391_01355 CDS
T05402
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
yma
Yersinia massiliensis
Pathway
yma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DA391_01355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yma03021
]
DA391_01355
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_01355
Enzymes [BR:
yma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DA391_01355
Transcription machinery [BR:
yma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DA391_01355
DNA repair and recombination proteins [BR:
yma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DA391_01355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AVX36430
LinkDB
All DBs
Position
299806..300795
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagttattctt
accctgaataagtctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccacctgaccgatgagaatgcatctatt
agtatgcgtatcaaagttcaacgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtctgttagtagacgcatgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ttggtaatcgagatggaaaccaatggtacgatcgatcctgaagaggcgatccgccgtgcg
gcaactatcttggctgaacaacttgaagctttcgttgacttacgtgatgtacgtcagccg
gaagttaaagaagagaagccagagtttgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctcgcttcacgtggtctttctttaggcatgcgcctagaaaat
tggccgccagctagcattgctgacgagtaa
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