KEGG   Yersinia massiliensis: DA391_04630
Entry
DA391_04630       CDS       T05402                                 
Name
(GenBank) transcriptional regulator
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
yma  Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:yma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:yma03000]
    DA391_04630
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yma02048]
    DA391_04630
Transcription factors [BR:yma03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    DA391_04630
Prokaryotic defense system [BR:yma02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    DA391_04630
SSDB
Motif
Pfam: HTH_3 HTH_19 HTH_31 DAHL Sulf_coat_C SWI2_SNF2
Other DBs
NCBI-ProteinID: AVX37007
LinkDB
Position
1017119..1017577
AA seq 152 aa
MTMASHYNKHHLDAASAEYMITTFANAVKTIPLMTGAKNEIEYHQALELIEILIDRGDLD
NPLFDLLAAKIAEYENSAPEFDSLNQQLANIPTGIAVLRTIIDQYGLKAADLEPQLGSKS
NVSNILNGRRALTVQHIKALSERFGVPADWFI
NT seq 459 nt   +upstreamnt  +downstreamnt
atgaccatggcatctcactacaataaacatcatcttgatgcagcaagtgccgaatacatg
atcacgacgtttgctaatgcagtcaaaactattcccctgatgaccggcgcaaaaaacgag
attgaatatcaccaggcacttgagttaattgagattctgattgatcgaggtgacttggat
aacccgctttttgatctgcttgcagcaaaaattgccgaatatgagaacagtgcgcctgaa
tttgacagtcttaatcagcagttagctaatatcccaacgggtattgccgttttgcgcacc
attattgatcagtatgggcttaaagctgcggatttagagcctcagttaggttctaaatct
aatgtgagcaatattcttaacggtcgtcgcgctttaaccgtccaacatatcaaagcactt
tcggagcgattcggtgttcctgcggattggtttatctga

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