Yersinia massiliensis: DA391_05450
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Entry
DA391_05450 CDS
T05402
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
yma
Yersinia massiliensis
Pathway
yma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DA391_05450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_05450
Enzymes [BR:
yma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DA391_05450
DNA repair and recombination proteins [BR:
yma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DA391_05450
Prokaryotic type
DA391_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVX37143
LinkDB
All DBs
Position
complement(1178494..1179174)
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AA seq
226 aa
AA seq
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MSASLSWHDVIGQEKEQPYFKDTLAYVAAERHAGKIIYPPQKDVFNAFRLTELDRVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLVNMYKELVTDIPGFERPNHGFLQSWAEQGVL
LLNTVLTVEAGNAHSHANLGWETFTDKVIAALNEHRDGVIFMLWGAHAQKKGRIIDTQRH
HILKAPHPSPLSAHRGFLGCQHFSQANVLLQQQGLPPIDWQPKLPS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctccctaagctggcacgatgttatcggccaggaaaaagaacagccctatttt
aaagatacattggcctatgtggctgcggaacgtcatgctgggaagattatctatcccccg
caaaaagacgtgtttaacgcgtttcgtctcactgaattagatagagttaaagtggtcatt
ttgggccaagacccataccacggacctaatcaggctcatgggctatcattttcagtgtta
cctggcgtccctgccccgccatctttagtgaatatgtataaagagctggtaactgacatt
ccaggcttcgaacgccctaatcatggctttttacaaagttgggccgagcaaggcgtgtta
ttactcaatactgtgctcactgtcgaagcaggcaacgcgcactctcacgctaaccttggc
tgggaaacctttaccgataaagtgattgcagcgctgaatgaacaccgtgacggcgtgatt
tttatgctgtggggagcacatgcgcagaaaaaaggccgtatcatcgatactcaacgccat
catattctgaaagcgccacatccatccccactctccgcacaccgaggttttcttggctgt
cagcatttctcgcaagcaaacgtattgttgcaacagcaaggtttaccgccaattgattgg
cagcccaaactgccttcttaa
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