Yersinia massiliensis: DA391_05640
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Entry
DA391_05640 CDS
T05402
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yma
Yersinia massiliensis
Pathway
yma00260
Glycine, serine and threonine metabolism
yma00460
Cyanoamino acid metabolism
yma00630
Glyoxylate and dicarboxylate metabolism
yma00670
One carbon pool by folate
yma00680
Methane metabolism
yma01100
Metabolic pathways
yma01110
Biosynthesis of secondary metabolites
yma01120
Microbial metabolism in diverse environments
yma01200
Carbon metabolism
yma01230
Biosynthesis of amino acids
yma01240
Biosynthesis of cofactors
yma04981
Folate transport and metabolism
Module
yma_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DA391_05640
09102 Energy metabolism
00680 Methane metabolism
DA391_05640
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DA391_05640
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DA391_05640
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DA391_05640
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DA391_05640
Enzymes [BR:
yma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DA391_05640
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Gene cluster
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AVX37179
UniProt:
A0A2R4NM28
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All DBs
Position
1218442..1219695
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGQIDYDDLARQAEKHQPKMIIGGFSAYSGI
VDWAKMREIADSIDAWLFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPGNQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVS
VFLERGYKVVSGGTENHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEAESRELAGWMCDVLDNINDEATIERVKQKVLAICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagatttatggcgtgcaatggag
caagaagtggtgcgccaggaagagcacatcgaactcattgcgtctgagaactataccagc
ccgcgtgttatgcaggcgcagggttctcagttaacgaacaagtatgctgaaggctatccg
ggcaagcgttactacggtggttgtgagtatgttgatgttgttgagcaactggccattgac
cgtgctaaagagctgttcggcgcagattacgctaacgttcaaccgcactccggttcacaa
gctaacgtcgcggtttactctgccttgctacaaccaggtgatactgtgctggggatgaat
ctggcacatggcggccatttgactcacggttcaccggttaacttctccggcaagctttac
aatatcgtgccttacggcatcgatgagtctggtcagattgattatgacgatttggcgcgt
caggcagaaaaacatcaaccaaaaatgatcatcggtggcttctctgcttactctgggatc
gttgattgggcaaaaatgcgtgagattgcagacagcatcgatgcatggctgttcgttgat
atggctcacgtagccggtttggttgctgcgggtgtttacccgaaccccgttccacatgca
catatcgtgaccacaaccacgcacaaaacactggctggcccacgcggtggcttgattttg
gcgaaaggtggcgatgaagatctgtacaaaaaactgaattcatctgtattccctggtaat
cagggtggcccattgatgcatgttatcgcgggtaaagcagtcgcgctgaaagaagccatg
gagcctgagttcaaggtttaccagcagcaagtggctaaaaacgccaaagccatggtgtct
gtgttcttggaacgtggttacaaagtcgtttctggcggtactgaaaaccacctgttcttg
cttgatttggtggataaagacatcaccggtaaagatgccgatgccgctttagggcgcgcc
aacattaccgtgaacaaaaacagcgtaccaaatgatccgaaaagtcctttcgtgacttca
ggtgtgcgtattggtagccctgcgattactcgccgtggcttcaaagaagcagaatctcgc
gaattggctggctggatgtgtgatgtgttagacaacatcaacgatgaagccactattgag
cgtgtgaagcaaaaagtattggcaatctgcgcccgtttaccggtttacgcataa
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