Yersinia massiliensis: DA391_05895
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Entry
DA391_05895 CDS
T05402
Symbol
srlR
Name
(GenBank) HTH domain-containing protein
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yma03000
]
DA391_05895 (srlR)
Transcription factors [BR:
yma03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
DA391_05895 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
MarR
FeoC
HTH_24
GntR
HTH_Mga
FaeA
HTH_5
HTH_IclR
DUF3731
Put_DNA-bind_N
HTH_20
DDRGK
HTH_AsnC-type
MarR_2
HTH_Crp_2
DsrD
TrmB
Motif
Other DBs
NCBI-ProteinID:
AVX37224
LinkDB
All DBs
Position
complement(1281476..1282246)
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AA seq
256 aa
AA seq
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MKPKQRQVAILEYLQQHGKTAVDELASHFSTTGTTIRKDLTSLEKEGAVIRTYGGVVLNR
DDVEQPIDRKTHINTDKKKQIAQAASKLIKDGDSLVFDAGSTVLQMVPHLTKFNNITVMT
NSLHIVNELVELNNDQTILMPGGTYRKGSASFHGSLAESAFDNFSFDKLFIGADGVDLKG
GVTTFNEVYHVSTAMCRAASHIILLVDSSKFGRKSPNVVCPLSAVDTLITDKGISAEYLQ
ALQDMGINIILVDKND
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaagcagcggcaagttgcaatactggaatatctccagcaacacggcaagacg
gcagtcgatgaactcgcctcccacttttcaaccaccggcacgactatccgtaaggattta
accagccttgaaaaagaaggggcggttatccgtacctatggcggggtagtgctaaaccgc
gatgatgtcgaacagccgattgatcgtaaaacccatattaataccgacaagaaaaagcaa
atcgctcaagcggccagtaagctcatcaaagatggtgacagtttagtttttgatgcgggg
agcaccgtgttacaaatggtcccgcacctgaccaaattcaacaatattacggtgatgacg
aacagcctgcatatcgtcaatgagctggtcgagttgaataacgatcaaactattctgatg
cccggtggcacgtatcgtaaaggatcggcgtcttttcatggcagtttggccgagtctgca
tttgataattttagtttcgataagctctttatcggtgccgatggcgttgatttaaaaggc
ggtgtgaccacctttaacgaggtttatcatgtcagcaccgcgatgtgccgcgccgccagc
cacatcattctactggtcgattcctccaaatttggccgtaaaagccctaatgtcgtctgc
ccgctcagtgccgttgataccctgattaccgataaagggatcagtgctgaatatctgcag
gcgctgcaagatatgggcatcaatatcattttggtagataaaaatgactaa
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