Yersinia massiliensis: DA391_07335
Help
Entry
DA391_07335 CDS
T05402
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
yma
Yersinia massiliensis
Pathway
yma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA391_07335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yma03019
]
DA391_07335
Enzymes [BR:
yma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DA391_07335
Messenger RNA biogenesis [BR:
yma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DA391_07335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
HI1480
AAA_22
P-loop_SecA
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AVX37480
UniProt:
A0A2R4NMX1
LinkDB
All DBs
Position
1601642..1602997
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNADILRAVEEQGYLVPTPIQSQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL
QLLSQNQAPIKGRRPVRALILTPTRELAAQIDENVQSYSKYLKLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKRELLSQMI
GEGDWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALEGYEPDPSIKADPIQNGRQGRGAQRPGMGRGSNAGRSQNGGGAAGRG
DSRNSRPRSQADGQRRPAGPSSRGRSRNPGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcttaaatgccgatatcctgcgcgctgttgaagagcagggc
taccttgtgccgacaccgattcaaagtcaggcaatccctgttgtattggcaggccgtgat
ttaatggctagcgcacaaactggtacgggcaaaacggccggtttcaccttgccgctgttg
cagttgcttagccagaaccaagcgccgattaaaggccgccgtccagtccgcgcgttgatt
ctaacgccgacccgtgaactggctgcgcagattgatgaaaacgtacagagttacagtaaa
tatttgaagttgcgttcgctggtggtatttggtggcgttagcatcaatccacagatgatg
aaattacgcggtggcgtcgatattttggtcgcgaccccaggccgtttactggatctggaa
catcagaacgcagtcgacctctccaagattgagattttggtgttggacgaagctgaccgc
atgctggatatgggctttattcacgatatccgccgcgtattggcaaaactaccggctaaa
cgccagaacctgctgttctccgcgacgttctcggatgagattaaaggtttggccagcaag
ctgttgcataatccggcatcggttgaagtggctcgtcgcaataccgcttccgagcaaatc
gcccaaagcgttcattttgtagataaaaatcgcaagcgcgagttgttgtctcagatgatc
ggcgaaggtgattggcagcaagtgttagtgtttacccgcactaaacacggtgcgaaccat
ttggctgaacagctaaataaagacggtattaccgcggctgctattcacggtaacaagagt
cagggcgcgcgtactcgtgcattggctgattttaaagacggtaaaattcgcgtattggtg
gcgacggatatcgcggctcgtggcctagatatcgatcagttgccgcatgtggttaactat
gagttgccaaatgtgcctgaagattacgtccaccgtattggccgtactggccgtgcagaa
cgcacaggtgaagcgatttcactggtttgcgttgatgagcataaactgctgcgtgatatt
gagcgtttgttgaagcgtgaaattccgcgtattgcgttggaaggttatgaaccagatcca
agcattaaagcggatccgattcaaaatggtcgccaaggccgtggtgcgcaacgtccaggt
atgggtcgtggcagcaatgcagggcgctcacaaaatggcggtggtgcagcaggtcgtggc
gatagccgtaacagccgcccacgtagccaagctgatggtcagcgtcgcccagccggtccg
tcttctcgcgggcgcagccgtaatccaggcgaataa
DBGET
integrated database retrieval system
