Yersinia massiliensis: DA391_08520
Help
Entry
DA391_08520 CDS
T05402
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yma03000
]
DA391_08520
Transcription factors [BR:
yma03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DA391_08520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_54
CggR_N
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AVX37694
LinkDB
All DBs
Position
1859862..1861067
Genome browser
AA seq
401 aa
AA seq
DB search
MQIRAFLRVAQTGSISQAAHNLFRTQSAITRSIRELEHILGESLFERHSAGMLLTEQGKS
ILPRAIQILDELQQVPPLIDDTGSDFSEPLWLYNVMRLKIFLALYQLHSTRNVANSLDIT
SSAVSAAIKTMEQGCGAVLFRRTAQGMMPTKMSRKIAPSISRALNEIRRIPEEIAAMKGI
VTGTVHVGALPLSRAGLLPKAIINAINAHETIKVATDESAFDRLVSELRGGNIDLIIGAL
RHDSSVDDLDKIKLFTEELILLTRPAHFLTGRDLMAADFDNIKWVLPRENAPSRHSLIKA
FRRLGMDAPQPVVETGDPTVVRELLLRSDMVAVVSSHQLEYEISIGVLTPLRIHLNETHR
DIGIMSRKGALHSPATRAFIRSLKEIIPGGPSGALESPFYL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcagataagagcattcctgcgagttgcacaaaccggaagtatctctcaggcggcacat
aatttatttcgcactcaatctgcgataacgcgttcaattcgtgagcttgaacacatttta
ggcgagtcgctatttgaacgacattcagcagggatgttattgacggagcagggaaaatct
attttaccgcgagcgattcagatacttgatgaactccagcaagtcccaccattgatagat
gatacaggctccgatttttctgaaccgctctggctgtataacgttatgcggttgaagatt
tttctggccttgtatcagctgcattccacccgcaacgtcgccaattcgttagatatcacc
tcatctgctgtcagtgcagcgataaaaaccatggagcaaggttgtggggccgtactgttt
cgtcgaacagcacaaggcatgatgccgaccaaaatgagcagaaaaatagccccatcgata
agccgcgcattaaacgaaatacgccgtattccagaagaaattgcggcgatgaaaggcatc
gtcaccggaaccgtgcatgttggtgcgctgccgttgagccgtgcggggctgttacccaaa
gcgataattaacgcgattaatgcccatgagacgataaaagtcgctaccgatgaaagtgca
ttcgatagactcgtgagtgagttacgcgggggaaatatcgatctgattattggcgcatta
cgtcatgactcgagtgttgatgacctcgataaaatcaaactctttaccgaagagctgatt
ctgctcactcgtccagcccatttcctgacgggccgagatttaatggcggcagattttgac
aatattaaatgggtattaccgcgagagaatgcaccgtcgaggcattcgttaatcaaggca
tttcgccgtcttggcatggatgcgccgcaacctgtggtggaaaccggtgaccctacggtg
gtgagggagttgctgctgaggtctgatatggtggcggttgtgtcatctcaccaattggaa
tatgaaatatcgattggggtgctaacgccattacgaattcatctgaatgaaactcatcgc
gacattggcatcatgagccgcaaaggtgcgctgcattcccccgcaacacgcgcattcatt
cgtagcttgaaagaaattatcccaggtggcccatctggagcgcttgaatcgcccttttat
ttgtag
DBGET
integrated database retrieval system
