Yersinia massiliensis: DA391_10115
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Entry
DA391_10115 CDS
T05402
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yma03009
]
DA391_10115
Enzymes [BR:
yma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DA391_10115
Ribosome biogenesis [BR:
yma03009
]
Prokaryotic type
rRNA helicases
DA391_10115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AVX37978
LinkDB
All DBs
Position
2148455..2149837
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AA seq
460 aa
AA seq
DB search
MSTTSFATLTLPAEQLSNLNELGYTEMTPVQAAALPAILKGQDVRAKAKTGSGKTAAFGI
GLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDDLKVLVLDEADRMLDMGFADAIDDVISYTPPTRQ
TLLFSATYPFGIERISARVQRDPLNVEVDDGEEAPAIEQMFFETTREKRLPLLIAILSHY
QPASCVVFCNTKKDCQSVYDALESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKDLELVVNFELAFDPEVHVHRIGRTGRAGMSGLAVSLCTPQEMTRAHAIEDY
LQIKLKWTPTDQVSRSTSPLLEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGK
IDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaacctcctttgctaccttgacgctgcctgctgagcagttgtccaatcttaat
gaacttggctataccgagatgacaccggtacaggctgcagcgctaccggcaatcctcaag
ggccaagatgttcgtgcgaaggccaaaaccggcagtggcaaaaccgctgcatttggtatc
ggtttgctagacaaaattgcggtaggtgagtttgtcactcaggcattagtgttgtgtcca
acccgtgaattggcagaccaagtcagtaaagagctacgccgcttggcccgtttcactcag
aacatcaaaattctgaccttatgtggcgggcagccgatgggccaccagttggactctctg
gtacatgcgcctcatatcgttgtcggtacaccagggcgcatccaagaacatttacgcaaa
aaaacgctggtgctggatgatctcaaggtgttggtcttggatgaagccgatcgcatgtta
gatatgggcttcgccgatgccatcgatgatgtgatttcttacaccccaccaacgcgccaa
acactgttgttctccgccacttatccgtttggcattgaacgaatcagtgcgcgggtacag
cgtgatccgctcaatgttgaagtggatgatggcgaagaagcccccgccattgagcagatg
ttctttgaaaccacgcgcgaaaaacgcttaccgctgctgattgccattctcagccactat
cagccagcatcttgtgtcgtgttttgtaacaccaaaaaagattgccagagcgtttacgac
gccttggaatcccgtggtatcagtgtactggcgttacacggtgatttagaacaacgtgac
cgtgatcaggtgctggtccgttttgccaaccgcagctgccgtgtgttagtggcaaccgat
gttgcagctcgtggtctggacatcaaagatttagagttagtggttaactttgaactggcg
tttgatcctgaagttcatgtacaccgcattgggcgtactggccgagcagggatgagcggg
ctggctgttagcttgtgtacaccacaagaaatgactcgcgcccatgcaattgaagattat
ctgcaaataaagttgaaatggacacccactgatcaagtgagccgcagtactagccctctg
ttggaacccgaaatggtgacgctatgcattgacggtggccgtaaagcaaaaattcgtcca
ggtgatatcttgggcgcactcaccggtgatgcgggattgacggcggcagacgtgggtaaa
atcgacatgttcccggtgcatgcctatgtggctatccgtaaggccagcgccaagcgcgct
ttacaacagctgcaacaaggtaaaatcaaaggcaaaaactgcaaagcccgtctattaaaa
taa
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