Yersinia massiliensis: DA391_11115
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Entry
DA391_11115 CDS
T05402
Name
(GenBank) type I secretion system permease/ATPase
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
yma
Yersinia massiliensis
Pathway
yma02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DA391_11115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yma02000
]
DA391_11115
02044 Secretion system [BR:
yma02044
]
DA391_11115
Transporters [BR:
yma02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DA391_11115
Secretion system [BR:
yma02044
]
Type I secretion system
RTX toxin transporter
DA391_11115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_22
AAA_18
AAA_16
Rad17
AAA_29
PRK
AAA_14
AAA_28
RsgA_GTPase
KAP_NTPase
RNA_helicase
CoaE
AGTRAP
MeaB
NB-ARC
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVX38163
UniProt:
A0ABM6UT83
LinkDB
All DBs
Position
2369743..2371863
Genome browser
AA seq
706 aa
AA seq
DB search
MTSTTSTQAIQPLAALAHAAACFDLPVEPSQLAHQLGLTSEKIDSIAVCRCAGWIGLRAR
KVYQQFERLGNLALPILFRDGAQWYVLLALNEDGAVIYNAASHQKQSVSQQQLASLWSGE
AILLAKAEQQTQKKTAFGFSWFMPVIAKYRHQLRNIILVSLLLQGILLVTPMLFETVIDK
VLVSRGIGSLMVLGSAMIALAIAEPCYTFLRGWLFSHLSSRVGAELNTRLYRHLLGLPLS
YFGAQQTGQTIAKVREMEQIRSFLTGSALTMLLDLIFVGTFITVMFCYSSQLTWIVLFSL
LCYLLFWWAVGGVLRQRVERQYEASAQNTAFLTETISGLETIKTSATEHQFNRGWRQSLA
GYVRASFACARTANTAEQGITLINKVTSAVLLWYGVNLVLVGDLSPGQFIAFTMFSGYVT
QPILRLAQIWQDFQHTQVALKRIGTILDCPAEPGSAGLSSGNEWTGNLTFKQVRFRYRPD
TAEVLQNLNLEIAGGEFIGITGPSGCGKSTLTKLLQRLYIPQHGQILVDGQDLAITDATA
LRCQMSVVLQDSVLFSGTLRDNICQCRPNADDTQVEHVARQAGAHDFIMSLPQGYQTQVG
ERGSLLSGGQRQRVALARALMAAPKILILDEATSALDYESEAAIMRQLPVITRNRTVICI
AHRLNTLRQCDRILVLKEGQVLEQGSHQALVDQAGVYARLWQLQTG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtacaacgtcaactcaggctattcaacccttggcggcattagcccatgccgct
gcgtgttttgatctgcccgtcgaaccctctcaactggcccatcagttgggattaacatcc
gaaaaaatagatagcattgctgtctgtcgctgcgcaggttggattggtttgcgcgcgagg
aaggtataccagcaatttgaacgtttggggaatttagcgctaccgatactctttagagat
ggtgcgcagtggtacgtgctgctggcattaaatgaagatggggcggtcatttacaatgca
gccagtcaccagaagcaatccgtcagccagcagcaactggctagtctgtggtcaggtgaa
gctattttgctggcaaaagcagaacaacagacgcagaagaaaaccgcgtttggcttcagt
tggttcatgccggtgatagccaagtatcggcaccaactccgcaacatcattttagtctcg
ttactactgcaaggcattttgctggtcacaccgatgctatttgaaacggtgatcgacaaa
gtactcgtcagtcggggcatcggaagtctaatggtactgggtagtgccatgattgcgttg
gcgattgctgagccctgttacaccttcttacgtggatggttgttctctcatctctccagt
cgcgtaggggctgagctcaatactcgcctttatcgccatttgcttgggctaccattgagc
tactttggtgcgcaacaaacggggcaaacaatcgctaaagtccgcgaaatggaacagatc
cgcagcttcctaacgggatccgctttgacgatgctgctggacctgatttttgtcggcact
tttatcacggtgatgttttgctacagcagccaattgacttggatcgtactgttttcattg
ctgtgttatctgctgttttggtgggcggtgggaggcgtcttacgtcaacgggttgagcgg
caatatgaagccagcgcacagaacactgcatttttgaccgaaaccattagcgggttggaa
accattaaaacgtcagccacagagcatcaatttaatcggggctggcggcaatcattagcg
ggttatgttcgggcttcctttgcttgtgcgcgaacagcaaatacggccgagcaaggtatc
acactgatcaacaaggtgacgtcggctgttttactttggtatggcgtgaatttggttttg
gtcggtgacctgagtcctgggcaattcatcgcatttacgatgttttcaggttatgtcact
cagcccatcttgcgtttggcacagatatggcaagatttccaacatacacaagttgccctg
aaacgcatcggtactatcttggattgtccggccgaaccgggcagtgcgggattatcctca
ggcaatgagtggacgggaaatttaacctttaaacaggtgcgttttcgctatcgccccgat
acggctgaggtgttgcagaatcttaatttggagattgcgggcggcgaatttatcggtatc
acagggccatcaggctgcggaaaatccacgctgaccaagttgttgcaacgtctctatatt
ccgcagcacgggcagattctggtggacgggcaagatttagccattaccgacgccacggca
ttacgttgccaaatgagtgtggtcttgcaagatagcgtgctgttctccggcacgttgaga
gacaatatttgccaatgccggcccaacgccgatgatactcaggttgaacatgtcgcccgc
caagcgggtgcccatgattttattatgtcgctgccgcaaggctatcaaacccaagttggg
gaaaggggcagtttactttctggcgggcaacgacagcgtgtggcgctcgctagagcactc
atggctgcccccaaaattctgattcttgatgaagctaccagtgctctggattatgagtct
gaggcagccattatgcgccaattaccggtgatcactcgcaatcgcactgtgatttgtatc
gcgcatcggttgaacactttacgtcagtgtgaccggattttggtcttaaaagaggggcaa
gtgctagaacaaggcagtcatcaggcgctggtggatcaagcgggtgtctacgcacgttta
tggcagttacaaacggggtaa
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integrated database retrieval system
