Yersinia massiliensis: DA391_12125
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Entry
DA391_12125 CDS
T05402
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yma
Yersinia massiliensis
Pathway
yma00061
Fatty acid biosynthesis
yma00071
Fatty acid degradation
yma01100
Metabolic pathways
yma01212
Fatty acid metabolism
yma02024
Quorum sensing
yma04146
Peroxisome
Module
yma_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DA391_12125
00071 Fatty acid degradation
DA391_12125
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DA391_12125
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA391_12125
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yma01004
]
DA391_12125
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yma04147
]
DA391_12125
Enzymes [BR:
yma01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DA391_12125
Lipid biosynthesis proteins [BR:
yma01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DA391_12125
Exosome [BR:
yma04147
]
Exosomal proteins
Exosomal proteins of breast milk
DA391_12125
Exosomal proteins of breast cancer cells
DA391_12125
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVX38346
UniProt:
A0A2R4NQH5
LinkDB
All DBs
Position
complement(2593167..2594861)
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AA seq
564 aa
AA seq
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MEKVWLKRYPADVPAEIDPDRYSSLVEMFENAALRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLTDS
GAAAIVIVSNFAHTLEKVVFNTQVKHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYYL
PDAISFRTALQKGRRLQYVKPDVINTDLAFLQYTGGTTGVAKGAMLTHRNMQSNLEQAKA
AYAPLLQPGHELVVTALPLYHIFALTMNCLLFIELGGRSLLITNPRDIPGLVKELSHYPF
TAMTGVNTLFNALLNNEEFHKLDFSTLRLSVGGGMPVQQAVAERWEKLTGKHLLEGYGLT
ECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLVDDEGQDVAFGEPGELWVRGPQVMLGYWQ
RPAATDEVLKDGWLATGDIATLDEQGFLRIVDRKKDMILVSGFNVYPNEIEDVVALHSKV
LESAVIGVPNEVSGEAVKLFVVKKDASLTQEELLTHCRRYLTGYKVPKIVEFRDELPKSN
VGKILRRELRDELVMNKSGDQDAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagtatggctaaagcgttatccggctgatgttcccgcagaaatagatccggat
cgctattcttctttggtggaaatgtttgagaacgcggcgttgcgttatgcggaccaacct
gcattcatcaatatgggcgaggtcatgactttccgtaaattggaagagcgtagtcgtgct
ttcgctgcttatttacagcagggtttgggtttacaaaagggtgaccgggtcgctttaatg
atgccaaacctgttgcaatatcctattgctctgtttggtattttacgggcaggcatggtt
gtagtgaatgttaacccgctctacaccccacgcgagttggaacatcagttgacggatagc
ggcgctgcggcaattgttatcgtctccaactttgctcatacgttagaaaaagtggttttt
aatacccaagttaaacacgttattttaacgcgtatgggcgatcaattgtccgcggcgaaa
gggacgctagtgaatttcgtggtgaaatacattaagcggctcgtgccaaaatactattta
ccggatgccatttctttccgcactgcgctgcaaaaaggccgtcgtctgcaatatgttaag
ccggatgtaattaacactgatttggcttttttgcagtataccggtggtacgaccggtgtg
gctaaaggggcaatgttaactcaccgcaatatgcaatcaaatttagaacaggcaaaagcg
gcttatgcgcccttgctgcagcctggccatgaattagtggtcaccgcgttgccgctttac
cacatttttgcgttaacgatgaactgcctgctatttattgaattaggtgggcgtagctta
ctgatcaccaacccgcgagatattccaggattggtgaaagagctgagccattatcccttc
accgccatgacgggagtgaatacgttattcaatgcgttgttaaacaacgaagaatttcac
aagttagatttctccacactacggttgtcggtaggtggtggcatgcccgtacagcaagct
gtggctgaacggtgggaaaaactcactgggaagcatttgctcgaaggttatggcttgacc
gagtgttcgccattagtgacgggtaacccttatgatttgaaacattacagcggcagtatt
ggtctgccagtcccctcaacggatgttcgattggtcgatgatgagggccaagatgtggca
tttggtgagccgggtgaactatgggtgcgtggcccacaagttatgttaggctattggcaa
cggcctgccgcgacagatgaagtcctaaaagacggatggctagcgacaggtgatatcgcg
acacttgatgaacagggtttcttacgtattgtcgatcgtaagaaagacatgattttggtt
tcaggttttaacgtctaccccaatgagattgaagatgtcgtcgcgttgcattcaaaagtg
ctggagtctgcggtcattggcgtgcctaatgaggtttccggtgaggcagtgaagctattt
gtcgtgaaaaaagatgcgtcactgacacaggaagaactgctaacccattgccgtcgctac
cttactgggtataaagtaccaaaaatagtagaattccgtgatgagttgccgaaatcgaat
gtcggcaagattttacgaagggaattgcgtgacgaattggttatgaataagtctggcgat
caagacgcagcttaa
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