Yersinia massiliensis: DA391_12215
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Entry
DA391_12215 CDS
T05402
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
yma
Yersinia massiliensis
Pathway
yma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DA391_12215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_12215
DNA repair and recombination proteins [BR:
yma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DA391_12215
RecFOR pathway proteins
DA391_12215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
Transposase_20
HTH_78
Motif
Other DBs
NCBI-ProteinID:
AVX38362
UniProt:
A0A2R4NQG6
LinkDB
All DBs
Position
complement(2615132..2615749)
Genome browser
AA seq
205 aa
AA seq
DB search
MIGRLRGIILEKQPPLVLLETNGVGYEVQLPMTCFYELPELGQEAIIFTQFIVREDAQLL
YGFNNKQERALFRELIKVNGVGPKLALAILSGMSAQQFVSAVEREDITTLVKLPGVGKKT
AERLVVEMKDRFKGLNGDLFNNTGDITLPVSTSAKVSDADNEAEAASALVALGYKPQEAS
RLVSKIAKPGADCETLIRDALRSAL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgatagggcgcctcagaggtatcattttggaaaaacagccgccgttagtgctgctggag
acaaacggtgttggctatgaagtccaactgcccatgacctgtttttatgagttgcccgag
ctggggcaagaagccatcatctttacccaatttatcgtccgcgaagacgcgcaactcttg
tatggcttcaataataagcaggagcgagcactgtttcgcgaattgatcaaagttaatggc
gtcgggccgaaattggcgttagctattctttccggcatgtcagcacagcaattcgtttca
gccgtagagcgcgaagatatcaccacattggtgaaattacccggcgttggcaagaaaacc
gcagaacgtttggttgttgaaatgaaagatcgcttcaaaggcttgaatggtgatttgttc
aacaataccggcgatattaccttacctgtatccacttcggcgaaagtctctgatgcagat
aacgaagctgaagcggcttcagcgttggtggctttaggttataagccacaggaagctagc
cgtttggtcagcaaaatagccaaaccgggtgcagattgtgaaacgttgatccgtgatgcc
ttacgttccgcattatag
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