Yersinia massiliensis: DA391_12345
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Entry
DA391_12345 CDS
T05402
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
yma
Yersinia massiliensis
Pathway
yma00541
Biosynthesis of various nucleotide sugars
yma01100
Metabolic pathways
yma01250
Biosynthesis of nucleotide sugars
Module
yma_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DA391_12345
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yma01005
]
DA391_12345
Enzymes [BR:
yma01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DA391_12345
Lipopolysaccharide biosynthesis proteins [BR:
yma01005
]
Lipid A
DA391_12345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVX38385
UniProt:
A0A0T9QNY3
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All DBs
Position
complement(2641280..2642134)
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AA seq
284 aa
AA seq
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MKQKVVSIGDIKVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMRIFQDLKQQFGVKIITDVHEASQAQPVSEVVDVIQLPAFLAR
QTDLVEAMARTGAVINVKKPQFVSPGQMGNIVEKFKEAGNDQVILCDRGSNFGYDNLVVD
MLGINVMVQATGGHPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA
HPEPNSAKCDGPSALPLAKLEPFLVQMKAIDDLVKSFPELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtggttagcattggcgacatcaaggtcgcgaacgatttgcctttcgtg
ctgttcggcggcatgaatgtgcttgaatctcgcgatctggcgatgcgtatttgtgagcat
tacgtcaccgtgacccaaaaattgggcatcccttatgtttttaaagcctcgttcgacaaa
gccaaccgttcttccattcactcataccgtggccccggtttggaagaagggatgcgaatc
ttccaagatttgaaacagcagtttggtgtgaaaatcatcactgacgtgcatgaagccagt
caggcgcaaccggtatcagaggtggttgacgttatccaattgcccgcattcttggcacgc
cagactgatctcgttgaagccatggcccgtaccggcgctgtaatcaacgtgaaaaaacca
caattcgttagccctggtcaaatgggcaatatcgtcgagaaattcaaagaggcgggtaac
gatcaagtgattctttgcgatcgcggcagcaactttggttacgacaatttagtggtagat
atgttgggcatcaatgtgatggtgcaagccactggcgggcatccggtcattttcgacgtg
acccatgcgctgcaatgccgtgatccgttcggtgctgcatccggtggtcgccgtgctcaa
gtggctgaactggcccgcgcgggtatggcggtgggtctggcagggctgtttatcgaagca
catccagaacctaacagtgccaaatgtgacggcccatcagcattgccattggcgaaactc
gagccattcttggtgcagatgaaagccatcgacgatttggtgaagagtttccctgagctg
gatactagcaagtaa
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