KEGG   Yersinia massiliensis: DA391_14180
Entry
DA391_14180       CDS       T05402                                 
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
yma  Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:yma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yma03400]
    DA391_14180
Enzymes [BR:yma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DA391_14180
DNA repair and recombination proteins [BR:yma03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DA391_14180
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 DEAD
Other DBs
NCBI-ProteinID: AVX38716
LinkDB
Position
complement(3011737..3013791)
AA seq 684 aa
MELKATSFGKHLAQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVNIQCKRGIVWGEMEFE
LPNQQVVRLHGTEWQETQRFYHHLLGIWQQWSEEMSLVCVEVLHKQVESIKRIEQQDKWF
KRSELGQLQDAIREAFAALPMPVQRLAEFESCRADYELCLRWLQQGRRSVDRRNQQWTQR
MLEVHQEFFQSVESSPLNESQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNDAL
PEQILLLAFGRQAADEMNSRIKERLAVDDIQAKTFHALALHIIQQGSRKTPAISKLESDS
QARRSLLIKHWQQQCSEKKAQAKGWREWLTDELEWDVADGDFWQDKRLAARLAGRLERWL
GLMRMHGGSQAEMIEQADEEIRDLFQKRIRLMAPLLKAWKTALKEEGAVDFSGLIHQAVN
LLDKGRFVSPWKHILVDEFQDISPQRAMLLTALRKQNKQTCLFAVGDDWQAIYRFSGAEL
SLTTAFSQNFGEGAECALDTTYRFNDRIGEIANRFIQQNPYQLKKPLNSLSKGNKKSVMI
LPNDQLEALLDKLSGFVKDDERILILARYHHLRPEILQKAATRWPKLNIDFMTIHASKGQ
QAEYVIIAGLHEGNDGFPAVARESILEDVLLPAPEDFADAEERRLLYVAMTRAKHQVWLL
QDTSNPSVFIDQLSELGVPSQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaggcgacatcttttggcaagcatctggcccagcatccctataatcgggtt
cgcttgctgaatgcgggcatcgaagtatgcggtgataaacatcagtacctgatccctttt
aaccagttggttaacatccaatgcaagcgcggtattgtctggggtgagatggagtttgaa
ttgccaaatcagcaagttgtgcgcttgcatggtactgaatggcaagagactcagcgtttt
tatcatcatttactgggcatctggcagcaatggagtgaggagatgagcctggtctgtgtt
gaggttttgcataagcaagttgagtcaattaagcgaattgagcagcaagataaatggttc
aaacgtagtgaattaggtcagttgcaagatgctatccgtgaggcttttgccgcgttaccg
atgccggtacaacggctggcggaatttgagtcttgtcgcgcagattatgaactttgtttg
cgttggttacagcaaggtcgccgcagcgttgatcgtcgcaatcagcaatggacgcagcga
atgctcgaggtgcaccaagaattcttccagagtgttgaaagttcaccactaaatgaatcg
cagagccgcgcagtggtcaatggcgaagattcggtattggtgctggctggtgcgggtagt
ggtaaaacatcggtgctggtggcccgtgcaggttggctattacgccgcaatgatgcgtta
ccagagcaaatcttactgttggcattcggtcgccaagcggctgatgaaatgaatagccgt
atcaaagaacgcttggcggtggatgatattcaggccaagacattccatgcgcttgcattg
catattattcagcagggtagtcgtaaaacccctgctatcagcaagttggagtctgatagt
caagccagaaggtcgctactcattaagcattggcagcagcagtgcagcgagaaaaaagcc
caagcgaaaggctggcgtgaatggctgactgatgagctggaatgggatgtcgccgacggt
gatttttggcaagataaacggcttgctgcacgtttggctgggcgactcgagcgttggtta
gggctgatgcgcatgcatggtggtagccaagccgaaatgattgagcaagctgatgaagaa
atacgagatctctttcagaagcgtatacggttaatggcccctttacttaaagcatggaaa
acagcattaaaagaagagggtgcggttgatttctcggggctgattcatcaggcggtaaac
ttgttggataaagggcgctttgtcagtccttggaagcatatcttagttgatgaatttcag
gatatctcgccgcagcgagctatgttactgaccgctttgcgtaaacaaaataagcaaact
tgcttgtttgctgtcggtgatgattggcaggcaatctaccgattcagtggtgcagagctt
tcactgaccactgcgttcagccagaatttcggcgaaggggcggagtgtgcattggatacg
acctatcgctttaacgaccgtattggtgaaattgcgaatcgatttattcagcaaaatccc
taccaattaaaaaaaccactgaatagcctgagcaaaggcaataaaaagtcagtgatgatt
ttaccgaacgatcaacttgaagcgctgctagataagttaagtggtttcgttaaggatgac
gaacgtatcctgatattggcgcgctatcatcatttacgccctgaaatcttgcaaaaagca
gctacacgttggcccaaactgaacattgattttatgactattcatgccagtaaagggcag
caggcggagtatgtgatcattgcgggtttgcatgaagggaatgacggttttcctgctgtg
gcacgagaatccattctggaagatgtattgctaccggcacctgaggattttgctgatgcg
gaagagcggcgcttgctttatgtcgccatgacccgagcaaaacatcaagtctggttactg
caagatacgtctaacccctccgtatttattgatcaactcagtgaactgggtgtcccgagc
cagcgcaaaccctag

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