Yersinia massiliensis: DA391_14320
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Entry
DA391_14320 CDS
T05402
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yma01002
]
DA391_14320
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yma01011
]
DA391_14320
Peptidases and inhibitors [BR:
yma01002
]
Cysteine peptidases
Family C82
DA391_14320
Peptidoglycan biosynthesis and degradation proteins [BR:
yma01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DA391_14320
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AVX38743
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Position
complement(3048727..3050619)
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AA seq
630 aa
AA seq
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MSIGKRNPQHALAFYCALMCGLMPAFTASAAAPVTSVDSSAVLSTSGQVIPATSSMSVAQ
SREQLSAILPKTVTPFYSPNLAVLYAANAMQPMWQDKVAVQRFQQQLAEVALSGIQPQFM
QWVKWLSDPDITGMARDVILSDAMLGYLHYISGVGANGSVWLYSNVPYKMAMPPAPELNR
WQQAVQEGSTAAYLTSLAPQHPQYNKMHQALKQMLADKRPWPQLANGPSLRPGQLSDDIP
ALREILDRTGMLHPITTAPVKAPEVIPVDNPAVAAVNDDLSVDEEKSRAQAHSLVVSPSA
APVADIPVTGGVASSSSAPLTSTAVITDNVYTPELVEAVKRFQLWHGLSDDGVIGVRTRE
WLNVSPQTRATLLALNIQRLRILPGQVDNGIMVNIPNYSLNYYKNGAEVLSSRVIVGRPS
RKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKARYDAGYFQRHGYTVLSGWSNEAQVVD
PSMIDWSMISPNNFPYRLRQAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALS
SGCVRVNKASDLANMLLQDAGWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDG
KPQFRTDIYNYDKTVRSGAQISPQAELLLQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagggaaacgaaatccgcaacacgcattagcgttttattgcgctttaatgtgc
ggcttgatgcctgcttttactgcctcggcagcggcaccggtcacatcggtagattcctct
gcggtgctgtccactagcggtcaggtaatacccgccacatccagcatgtcggtggcacaa
agccgtgaacaactgtcggcaatattgcctaaaacagtgacgcctttttattcacctaat
ctagccgtgctatatgctgctaatgcgatgcaaccgatgtggcaggataaggtcgctgtt
cagcgttttcagcaacaactcgccgaagtggcactttccggtattcaaccgcaatttatg
cagtgggtaaaatggctgagtgatcctgacattaccggcatggcgcgggatgtgatttta
tctgatgccatgctgggatatctgcactatatctcgggtgtgggtgccaacggcagtgtg
tggttgtacagcaatgtaccctacaagatggcaatgccaccggcccccgagctaaaccgc
tggcagcaagcggtacaagagggttcgactgccgcctatctgacgtcattagctcctcag
cacccccaatacaataaaatgcaccaagcattaaaacagatgctggcagataaacgccct
tggccacagttggcgaatggcccaagcttacgccctggtcagctcagtgacgacattcca
gcattgcgagaaatcctcgatagaactgggatgttacaccctataacgactgcgccagtt
aaagcgccagaagtcatccctgtagataacccagccgttgccgccgttaatgatgacctc
tcggttgatgaagagaaaagtcgcgctcaagcacacagtctggtggtgagcccttcagca
gcccctgttgctgatattcctgtcacaggtggtgtggcttcatcttcatctgcgccgctc
acgagtaccgctgttatcactgataatgtgtatacgccagagctggtggaggcggtaaaa
cgcttccagctgtggcatggactgagtgatgatggtgttatcggtgtacgtacccgtgaa
tggttaaatgtctcaccccaaacgcgagcaacgttgttagcattaaatatccagcggtta
cgcattttgccggggcaggttgataacggcattatggttaacattccaaactattctctg
aattattataagaatggtgcggaagtgctctcatcaagagtcattgtggggcgtccaagt
cgtaagacgccactgatgagcagtgcattgaataatgttgtcgtcaatccaccttggaac
gtgccgacgtctctggtgcgccaagatatcgtgccgaaagcacgctatgatgccggttat
ttccaacgccacggttataccgtgctgtctggttggagtaatgaggcgcaagtcgttgac
ccttccatgattgattggagcatgatttcgcctaataacttcccttatcgtttgcgtcag
gcaccaggcgcgagtaattcattgggaagatttaaattcaatatgcctagctctgatgct
atttatttacatgatacgccgaaccatggactgttccagaaggatattcgtgcattgagt
tcaggctgtgtgcgggtcaataaagcctctgatttagccaatatgctgttgcaagatgct
ggctggaatgatgcgcgagtgtcatcgacgcttaaacaaggggataccacttacgtcaat
atccgccaacgtgttccggtgcaattgtattacctaacggcgtgggttgcggatgacggt
aagccacaatttagaacagatatttacaattatgataagacggtgagatccggtgcacaa
atctcacctcaagctgaacttttgctgcaataa
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