Yersinia massiliensis: DA391_15605
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Entry
DA391_15605 CDS
T05402
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
yma
Yersinia massiliensis
Pathway
yma00020
Citrate cycle (TCA cycle)
yma00190
Oxidative phosphorylation
yma00650
Butanoate metabolism
yma00720
Other carbon fixation pathways
yma01100
Metabolic pathways
yma01110
Biosynthesis of secondary metabolites
yma01120
Microbial metabolism in diverse environments
yma01200
Carbon metabolism
Module
yma_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yma_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yma_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DA391_15605
00650 Butanoate metabolism
DA391_15605
09102 Energy metabolism
00190 Oxidative phosphorylation
DA391_15605
00720 Other carbon fixation pathways
DA391_15605
Enzymes [BR:
yma01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DA391_15605
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
HI0933_like
Pyr_redox_2
DAO
FAD_oxidored
Thi4
FAD_binding_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AVX38974
UniProt:
A0A2R4NS85
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Position
complement(3360632..3362398)
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRLDDGSIYQRPFG
GQSLNFGGGQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAFVGC
TAICIETGEVVYFKASATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQAITVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESLMEQGASRDASDSDIEASLDRMNRWNNTRSGEDPVEIRKALQACMQNNFSVFREGDAM
ANGLEELKVIRERLQNARLDDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAH
SRFDFPERDDANWLCHSLYLPDTESMTRREVNMQPKLRPAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccggtcagagagtttgatgctgttgttattggtgcaggtggtgcaggtatg
cgcgccgcgctgcaaatttcccaaatggggctgtcttgcgccctgatatctaaagttttc
ccgactcgttctcataccgtgtctgcacagggcggtattaccgttgccttgggtaatacc
cacgaagacaactgggaatggcacatgtatgacaccgtcaaaggttctgattatatcggt
gaccaagacgctatcgagtatatgtgtaaaaccggcccagaagcggttctggaactggaa
cacatggggttacctttctcccgtttagacgatggcagcatttatcagcgtccattcggt
ggacagtcgctgaactttggcggtgggcaagccgcacgtactgcggcggcggctgaccgt
acagggcatgcactgctgcacaccctttatcagcaaaacctgaaaaaccacaccaccatt
ttttctgaatggtatgccttggatttagtgaagaatcaggacggggctttcgttggctgt
accgctatctgcattgaaaccggtgaagtggtttatttcaaagctagtgcaacgatattg
gcaacaggcggagcggggcgcatttatcaatccaccaccaatgcgcacattaataccggt
gacggtgttggtatggcactgcgtgcgggtgtacccgtgcaggatatggaaatgtggcag
ttccacccgaccggtatcgccggtgcaggggtactggtcacagaaggctgccgtggcgaa
ggcggttatttgctgaataagcacggcgagcgctttatggaacgttatgccccgaacgcc
aaagatttggcgggtcgtgacgtagtggcacgttccattatgatcgaaatccgtgaaggc
cgtggttgtgatggtccttggggtccacatgccaaactgaagttggatcacttaggtaaa
gatgtgctggagtcccgtctgccgggtattctggagttatcacgtacctttgcccacgtc
gacccagtcaaagaacctattccagtgatcccaacgtgccattacatgatgggcgggatc
ccaaccaaagtgacgggtcaggcgatcaccgtaaatgaaaagggtgaagatgttgtaatc
cctggtctgttcgctgtcggtgaaattgcctgtgtttccgtccatggtgcaaaccgtttg
gggggcaactcattactggacctggtggtatttggtcgcgctgctggcatgcatctgcaa
gagtcattgatggagcagggtgccagccgcgatgctagcgattcagatattgaagcttca
ctcgatcgcatgaatcgttggaataacacccgttcaggtgaagacccagttgagatccgt
aaagcactacaagcctgcatgcagaataacttctcggtcttccgtgaaggtgatgccatg
gcaaacggcttggaagaactgaaagttatccgtgaacgtctgcaaaatgcccgtctggat
gacacttccagtgagttcaatacccaacgtattgaatgtttggaattggataacctgatg
gaaaccgcgttttccaccgctgtgtcagcaaacttccgtaccgaaagccgtggcgcgcat
agtcgcttcgacttcccagaacgtgatgatgcgaactggctgtgccactcgctgtatttg
ccagacactgaaagcatgacccgccgtgaggtaaacatgcaacctaagctacgccccgcc
ttcccgccgaaagtgcgttcttattaa
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