Yersinia massiliensis: DA391_16715
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Entry
DA391_16715 CDS
T05402
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
yma
Yersinia massiliensis
Pathway
yma03030
DNA replication
yma03430
Mismatch repair
yma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DA391_16715
03430 Mismatch repair
DA391_16715
03440 Homologous recombination
DA391_16715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yma03032
]
DA391_16715
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_16715
Enzymes [BR:
yma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DA391_16715
DNA replication proteins [BR:
yma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DA391_16715
DNA repair and recombination proteins [BR:
yma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DA391_16715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_30
AAA_18
PIF1
AAA_2
ResIII
AAA_14
AAA_assoc_2
AAA_16
AAA_7
TsaE
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVX39165
LinkDB
All DBs
Position
complement(3569465..3571456)
Genome browser
AA seq
663 aa
AA seq
DB search
MSYQALARKWRPQTFADVVGQEHVLTALANSLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGTCANCLEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKVIDV
EVIRTLLEKILQVEQISSDARALQLLARAADGSMRDALSLTDQAVAMGDGSITTATVSQM
LGTLDDEQPLTIIEALVSADGARVMAQVEQAASRGVDWENLLVETLSLLHRIAMVQLLPS
MLDNHYATIEPRLRELARTLPPADIQLYYQTLLVGRKELAYAPDRRMGVEMTLLRALAFH
PKATIVEPQAMPAVAPTAAVSHHAPATQHEHHAQSSAVNSQTAPVDAQHDVPPLGATAQV
STQLPDSTAQLLQARTQLLRQSGTTTTKKNEPAALGKARPANSALERLASVTERSQQRLA
AKSTEEKKPVKEEAYRWVAQNQPDAVAEPVATPKALRTALEHEKTPELSAKLAEEAMMRD
LWTAEIDKLQIPKLVQQLALNAFKEEIEAGNICLHLRSAQRHLNSPSAQKALAEALSELR
GLAVTLSVVEDDNPAERTPLEWRQTIYEEKLSQARQSIIGDNNIQTLRRFFDAELDEESI
RPV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggcccttgcccgtaagtggcgcccccaaacgtttgcagacgtcgttggt
caggagcatgttctgacggcgctagccaatagcctttctttagggcgaattcatcatgcc
tatctattttccggcactcgcggcgttggtaagacttcaatcgctcgattgttagccaaa
gggcttaactgcgaaacgggtattaccgcgacgccgtgcggtacttgtgctaactgtctt
gagatcgaacagggtcgttttgtcgatctgatcgagatagatgcagcctcacgtacgaaa
gtagaagatacccgagagttactggataatgtgcaatatgcgccggcacgtggccgcttc
aaggtctacttgatcgatgaagtacacatgttgtcgcgccacagtttcaatgcactgcta
aaaacccttgaagaaccgccagcccatgtgaagttcctgctggcgaccactgatccgcaa
aagttgccagtgacgattctttctcgctgcttgcaattccatctcaaagtgatcgacgtc
gaagttattcgcacattgctagagaaaatattgcaggttgagcaaatcagtagtgatgcc
cgcgcattgcaattactggcgcgggctgctgatggcagtatgcgtgatgctcttagctta
acggatcaagcggtcgcaatgggcgatgggagtattactacagccacggtcagccagatg
ttgggtacgctggatgacgaacagccactgaccattatcgaagcattggtcagtgcggat
ggcgcgcgggtcatggcgcaggtagaacaagcagcatcacgcggcgtcgactgggaaaac
ctattggtcgaaacgttaagtctactacaccgtattgccatggtgcagttgctaccatcg
atgctggataatcactacgcgaccattgagccacgtttacgtgaactggctcggacatta
ccgcctgctgatatacaactttattatcaaacacttttggtgggccgcaaagagctggct
tacgcgccggaccgccgtatgggcgttgaaatgacgttattacgcgcattggcttttcat
cctaaggcgacaattgttgagcctcaagcgatgccagcagtagcgccgacggcggccgtg
agtcatcatgcacccgcaactcaacatgagcaccatgcgcaaagctcggcagtcaattca
caaaccgcgccagtcgatgcgcagcatgatgtcccgccactcggcgccaccgcgcaagtc
agtactcagctacccgactctactgcgcaacttcttcaagcgcgcacgcagctactgcgg
cagtcggggacgacgaccacaaaaaagaatgaaccggcggcgctaggaaaagcgcggccg
gcaaactcagcacttgagcgtttagcttcggtgactgagcgcagccagcagcgtttggcc
gccaaatcaacggaagagaaaaaaccagtaaaagaagaggcttatcgctgggttgcgcaa
aatcagcctgatgctgttgcggagccagttgctacgccaaaagcgctgcgcacggcactg
gaacatgaaaaaacgccagagctttcggctaaattagctgaagaagccatgatgcgtgac
ctatggacagcggaaatcgataagctgcaaattcctaaattggtgcaacaactcgcgctg
aatgcatttaaagaagaaatagaagcaggtaatatttgtcttcacctacgctcagctcag
cgccatttaaattcgccatcggcacaaaaggcgctggcagaggctttgagtgaattaaga
ggcctcgctgtgacactcagcgtggttgaagatgataatccagcggagcgcaccccgttg
gagtggcgtcagacgatttatgaagaaaaactgtcgcaagcgcgtcagtcaattatcggg
gataataatattcagacactgcgccgtttcttcgacgcagaactggatgaagagagtatc
cggccggtttaa
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