Yersinia massiliensis: DA391_16915
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Entry
DA391_16915 CDS
T05402
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yma03032
]
DA391_16915
03036 Chromosome and associated proteins [BR:
yma03036
]
DA391_16915
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_16915
DNA replication proteins [BR:
yma03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DA391_16915
Chromosome and associated proteins [BR:
yma03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DA391_16915
DNA repair and recombination proteins [BR:
yma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DA391_16915
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AVX39202
UniProt:
A0A0T9PJY3
LinkDB
All DBs
Position
complement(3612991..3613263)
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVRERSARTG
RNPQTGKEISIPAAKVPSFRAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatcgacaaaattgccgctggtgctgatatttctaaagcggcc
gctgggcgtgcattagatgcaattattgcttctgttactgaatctttgaaagaaggtgat
gacgtagctctggttggttttggtacttttgcagtccgtgagcgttctgcacgtactggc
cgtaaccctcagacaggcaaagaaatcagtattccagcggctaaagtaccaagcttccgc
gccggtaaaggtctgaaagacgctgtaaactga
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