Yersinia massiliensis: DA391_17145
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Entry
DA391_17145 CDS
T05402
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_17145
DNA repair and recombination proteins [BR:
yma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DA391_17145
Archaeal homologous recombinant proteins
DA391_17145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AVX39245
UniProt:
A0A2R4NSY5
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Position
3664735..3665973
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AA seq
412 aa
AA seq
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MRIIHTSDWHLGQHFFTKSRAAEHQAFLHWLIKQIEENQVDALIVAGDIFDTGSPPSYAR
ELYNRFVVDIQVTGCQLVVLGGNHDSVSTLNESRGLLSYLNTTVISSANSNLEQQVITLK
NRQQEPAALLCAVPFLRPRDLVTSQAGESSGQKQLALQEAIAGHYLALYQQAVELRSKLN
LAIPIIATGHLTTVGVTTSDSVREIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEY
IRYSGSPIALSFDELGKEKSVYLVEFTQQTLTSVTPLIIPQFQPMRLIKGDLQQIEQQLT
QFADHQGLPVWLDIEVATQDYLTDIQRRIQALAADLPVEVVLLRRSKEQRNNLIERQEKE
TLNELSVTEVFERRLALESDLAEPRQQRMRQLFGQAVEDITQGKDAAEEQPL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccatacctctgattggcatttaggccagcatttcttcaccaaaagccga
gctgctgaacatcaggcgttcctgcactggctcattaagcagatcgaagaaaatcaggta
gatgcgctgattgttgcgggtgatattttcgatactggctcaccaccaagctatgcacga
gagctctataaccgttttgtggtggatatccaagtcactggctgtcagttggttgtgctc
gggggcaatcatgattcagtatcgaccctcaatgagtctcggggtttactttcctatctc
aatacaacagtgatctcttctgctaatagcaacctcgaacagcaagttattacattgaaa
aaccgccagcaagagcctgccgccctactgtgtgctgtccccttcttacgcccgcgtgac
ttagtcaccagccaagcaggcgaatctagtgggcaaaaacagctggccttgcaagaagcc
attgcaggccactatttggcgttatatcagcaagccgttgagctgcgtagcaaattgaac
ctagcgataccgattattgccactgggcatctcaccactgtgggagtgacaacctcggac
tctgttcgtgaaatctatattggtacactggatgcctttcctgcgcaggcgtttccaccg
gcagattacattgcattaggccatattcatcgtgctcaacaggtcgcaaaaaccgagtat
attcgctatagcggatcccccatcgcgctaagttttgatgagctgggtaaagagaagagt
gtctatctggttgaatttacccaacaaacattgacatcagtcaccccactcatcatcccg
cagtttcaacccatgcggcttatcaaaggggatttgcagcaaatagaacagcaattaact
caatttgctgaccatcaaggcttacccgtatggcttgatatcgaagttgccactcaagac
tatcttactgatatccaaaggcgtattcaggcactggccgctgacctccctgttgaagtc
gtgttattacgccgtagcaaagagcaacgcaacaatctgattgagcgccaagagaaagaa
acacttaatgaattgagtgtcactgaggtcttcgagcgcaggcttgctctagagagcgat
ttagctgagccgcgccagcaacgaatgcgccagctatttggccaagcggttgaagatatc
acgcaaggaaaagatgccgcagaggagcagccattatga
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