Yersinia massiliensis: DA391_18170
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Entry
DA391_18170 CDS
T05402
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yma03021
]
DA391_18170
Transcription machinery [BR:
yma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DA391_18170
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AVX39421
UniProt:
A0A0T9NPB0
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Position
complement(3899640..3900638)
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AA seq
332 aa
AA seq
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MSQNTLKVNELHEDADFDENSTETEIFDEKALVEDEPTESELAEDELLAQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
SDENENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQTQGLSIEALFRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttgcatgaagatgctgattttgatgaaaac
agtacggaaactgaaattttcgatgaaaaagcattagtagaagatgaacctactgaaagc
gagttagcggaagatgagctgttggcgcaaggcgttacccagcgcgtgctggatgcgaca
cagctctaccttggtgagattggttattcgccgctgctaacagcagaagaagaggtttat
tttgcccggcgtgcattgcgcggagatgtgccttcacgtcggcgtatgatcgaaagtaac
ttacggttagtggtgaagatcgctcgtcgttacagtaatcgtggcttagcgctgctggat
ctgattgaagagggtaacctcgggttgatccgtgcggtcgaaaagtttgatcctgaacgc
ggtttccgcttctccacttacgccacatggtggattcgtcaaacgattgaacgggccatt
atgaaccaaacccggactattcgtttacctatccatatcgtcaaagaattaaacgtttat
ttgcgtaccgcacgagaactttctcataaattagatcatgaaccgagtgctgaagagatt
gctgagcaactcgacaaaccggtcgatgatgtgagccgtatgttacgcctcaacgaacgt
atcacttctgttgatacgcctttaggcggcgactcagagaaagccttgttggatattctg
tctgacgaaaatgaaaacggtccggaagatacaacgcaagatgatgatatgaaacaaagt
atcgtcaaatggctgtttgaattgaatgcaaaacagcgcgaagtattggcccgtcgtttt
ggtctgttgggatatgaagccgcaacgttagaagacgttggccgtgagattggcttaaca
cgtgaacgtgttcgccagattcaggtagaaggcttacgccgcctgcgggaaattttgcag
actcaaggtttgagcattgaggcattattccgcgaataa
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