Yersinia massiliensis: DA391_18395
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Entry
DA391_18395 CDS
T05402
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yma03016
]
DA391_18395
Enzymes [BR:
yma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DA391_18395
Transfer RNA biogenesis [BR:
yma03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DA391_18395
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AVX39462
UniProt:
A0A2R4NTL2
LinkDB
All DBs
Position
3951900..3952460
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AA seq
186 aa
AA seq
DB search
MINAVDKTNRRLFFALALPKPLQQKIVQWRADHLPPEAGHPIAAANLHLTLAFLGEVSAA
KAQVLQQQAGRISQSGFNVMLDDIGHWPSSGVVWLGCKNPPRGLLQLAQLLRSQAARSGC
YQTPLPFHPHVTLLRGAVRPVALPAKTQNESFRGDHFSLYESVFARGRTRYNVIQSWPLT
GSSKDI
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgccgttgataaaactaaccgccgcctgttctttgcactggcactgcctaag
ccgctacaacaaaaaattgtacagtggcgggcagaccatctcccaccggaggcaggacat
ccgattgccgcagcgaatctgcacctgacactggcttttctcggtgaggtgagcgctgcc
aaagcgcaagtattacaacagcaagcgggccgcatcagtcaatcaggctttaacgtgatg
ctagatgatattggtcattggcccagttccggcgtggtatggctcggttgtaaaaacccg
cctcgagggttgttgcaattagcgcaattactgcgctcacaggccgcacgcagtggttgt
tatcaaacgccgctgccttttcatccccatgtgaccctactgcgtggcgctgtgcgccca
gtcgctctaccagccaaaacccaaaatgaaagcttccgcggggatcatttctcattgtat
gaatctgttttcgcacgtggccgcactcgttataacgtcattcaaagctggccgttgacg
ggcagtagcaaggatatctga
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