KEGG   Yersinia massiliensis: DA391_18520
Entry
DA391_18520       CDS       T05402                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
yma  Yersinia massiliensis
Pathway
yma00010  Glycolysis / Gluconeogenesis
yma00020  Citrate cycle (TCA cycle)
yma00260  Glycine, serine and threonine metabolism
yma00280  Valine, leucine and isoleucine degradation
yma00310  Lysine degradation
yma00380  Tryptophan metabolism
yma00620  Pyruvate metabolism
yma00630  Glyoxylate and dicarboxylate metabolism
yma00640  Propanoate metabolism
yma00670  One carbon pool by folate
yma00785  Lipoic acid metabolism
yma01100  Metabolic pathways
yma01110  Biosynthesis of secondary metabolites
yma01120  Microbial metabolism in diverse environments
yma01200  Carbon metabolism
yma01210  2-Oxocarboxylic acid metabolism
yma01240  Biosynthesis of cofactors
Module
yma_M00009  Citrate cycle (TCA cycle, Krebs cycle)
yma_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yma_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
yma_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:yma00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DA391_18520 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DA391_18520 (lpdA)
   00620 Pyruvate metabolism
    DA391_18520 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DA391_18520 (lpdA)
   00640 Propanoate metabolism
    DA391_18520 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DA391_18520 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DA391_18520 (lpdA)
   00310 Lysine degradation
    DA391_18520 (lpdA)
   00380 Tryptophan metabolism
    DA391_18520 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DA391_18520 (lpdA)
   00670 One carbon pool by folate
    DA391_18520 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:yma04147]
    DA391_18520 (lpdA)
Enzymes [BR:yma01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DA391_18520 (lpdA)
Exosome [BR:yma04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DA391_18520 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 Thi4 FAD_binding_3 DAO
Other DBs
NCBI-ProteinID: AVX39483
LinkDB
Position
complement(3978207..3979634)
AA seq 475 aa
MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETILVERYSTLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVINQLTGGLAGMAKGRKVKVVNGFGKF
TGANTLVVEGENGPTTITFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALALKTVPERLL
VMGGGIIGLEMGTVYHALGSKIDVVEMADQVIPAADKDVVKVFTKRISKQFNLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGQAGVEVDERGFIHVDK
QLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGMKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgatgagtactgaaattaaaactcaggtcgtggtacttggggcaggtccagcagggtac
tctgctgcttttcgttgcgcggatttaggtttagaaaccattctggttgagcgttactcc
actctgggtggcgtttgtctgaatgtgggttgtattccatccaaggcgttgttacacgtt
gctaaagtgatcgaagaagccaaagcactggctgaacacggtatcgtttttggcgagcct
aaaactgacatcgataaagtacgtgtttggaaagagaaagttatcaatcagttaaccggt
ggtttggcaggtatggctaaaggccgtaaagtcaaagtggttaacggtttcggtaaattt
accggtgcgaataccttagtggttgaaggcgaaaatggtccaacgaccatcaccttcgat
aacgcgattatcgctgcgggctcacgtccaatccaactgccattcattcctcatgaagac
ccacgtgtttgggactcaactgatgcgctggcactgaaaactgtccctgagcgtctgttg
gtcatgggtggcggtatcatcggtctggaaatgggtaccgtttaccacgcgctgggttct
aagattgacgtcgtagaaatggctgaccaggtgatccctgctgctgataaagacgtggtg
aaagtcttcactaaacgtattagcaagcaattcaacctgatgctggaaactaaagtcact
gccgtagaagccaaagaagatggtatctacgtcacgatggaaggcaaaaaagcaccggct
gaaccacagcgttatgatgcggttctggtggctatcggccgcgtacctaacggtaagctg
ctggatgcaggtcaggctggcgttgaagtcgacgaacgtggctttatccacgtggataag
caactgcgtactaacgtgccacacatctttgctatcggtgacatcgtaggtcagccaatg
ctggcacacaaaggtgttcacgaaggtcacgttgccgctgaagttatctctggcatgaag
cattacttcgatccgaaagtgatcccatccattgcatacactgaaccagaagtcgcatgg
gttggtttgaccgagaaagaagcaaaagaaaaaggcatcagctacgaaacctccaccttc
ccgtgggcggcatcgggccgtgctatcgcttcagattgcgctgatggtatgactaaactg
attttcgacaaagaaactcaccgtatcatcggtggtgcgattgtcgggactaacggcggc
gagctgttaggtgaaatcggtctggcaatcgagatgggttgtgatgcggaagatcttgcg
ttgaccatccatgctcacccaacactgcatgaatctgttggtctggcggcggaaatctac
gaaggtagcattaccgacttgcctaacccgaaagcgaaaaagaaataa

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