Yersinia massiliensis: DA391_19805
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Entry
DA391_19805 CDS
T05402
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yma
Yersinia massiliensis
Pathway
yma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA391_19805 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yma03019
]
DA391_19805 (pnp)
03016 Transfer RNA biogenesis [BR:
yma03016
]
DA391_19805 (pnp)
Enzymes [BR:
yma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DA391_19805 (pnp)
Messenger RNA biogenesis [BR:
yma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DA391_19805 (pnp)
Transfer RNA biogenesis [BR:
yma03016
]
Prokaryotic type
tRNA degradation factors
DA391_19805 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
UPF0181
Spt6_S1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AVX39701
UniProt:
A0ABM6UXY3
LinkDB
All DBs
Position
complement(4284539..4286659)
Genome browser
AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQINPDIVAMIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADILSEDQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWHPEPVNE
ALNARVAELAEARLGDAYRITEKQERYTQVDAIKADVTEALLAQDETLNPAEIQDILGDV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPSPSE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDENFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRIRLSIKEATTPDAEAPAPEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtacggtcaacataccgtgaccatcgaaaca
ggcatgatggctcgccaagcaactgctgctgtaatggtaagcatggacgacaccgcagta
ttcgtcactgttgttggccaaaagaaagccaagccaggtcagagcttcttcccactgact
gttaactatcaggagcgtacctacgctgctggccgtatcccaggtagcttcttccgtcgc
gaaggccgcccaagtgaaggcgaaacactgacttcacgtctgattgaccgcccaattcgc
ccactgttcccagacagcttcctgaatgaagttcaggttattgcgactgttgtttctgtt
aatccacaaattaacccagacatcgtggcaatgattggtgcttcagcggcattgagcctg
tcaggtattccattcaacggtccaatcggtgctgcgcgtgttggtttcatcaacgaccag
tatgtcctgaacccgaccactgacgagctgaaagaaagccgtctggacttggttgttgca
ggtactgctggcgcagtattgatggttgaatctgaagcagacatcttgtctgaagatcaa
atgttgggcgcggttgtctttggccacgaacaacagcaagttgtgattgaaaatattaat
gccttggttgccgaagcgggtaaaccgaagtgggattggcatccagagccagtgaacgaa
gcactgaatgcgcgtgtggctgaactcgctgaagctcgtttgggcgatgcataccgtatc
actgagaaacaagagcgttacactcaggttgatgctattaaagctgacgtgactgaagcg
ttgttggcacaagacgaaaccttgaatcctgctgaaattcaggacatcttgggtgatgtt
gagaagaacgttgttcgtagccgtgtattacgtggcgaaccgcgtatcgatggccgtgaa
aaagacatgatccgtggcttggatgtgcgtactggcgtattgccacgtactcatggctct
gcgttgttcacccgtggtgaaactcaggcactggtcactgcaactctgggtactgcccgt
gatgcacaaaatattgatgagttgatgggtgagcgtactgactcattcctgctacactat
aatttccctccatattgtgttggtgaaaccggtatggttggctcaccgaagcgtcgtgag
attggtcatggccgtctggcgaaacgcggtgtgttggcagtgatgccaagcccgagcgag
ttcccgtacactgttcgtgtggtttctgaaatcaccgaatctaacggttcttcctcaatg
gcttctgtttgtggtgcttctttggcgctgatggatgcaggtgtgccgattaaagccgct
gttgctggtatcgcgatgggtctggttaaagaagacgaaaactttgtggttctgtctgac
attctgggtgacgaagatcacttgggcgacatggactttaaagtagcgggtagccgtgac
ggtatcagcgcattgcaaatggacattaaaattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaagctaagggtgcgcgtctgcacattctgggtgttatggaacaggct
atcagcacacctcgtggtgatatctctgagttcgctccacgtatctacaccatgaaaatc
aatcctgagaaaattaaggatgtgatcggtaaaggtggttctgtgattcgtgcgctgact
gatgaaacaggcactacaattgaaatcgaagatgatggcaccatcaagattgcagcaact
gacggcgataaagcaaaacacgcaattcgtcgcattgaagaaattacagctgaaatcgaa
gtgggccgtatctatgcgggtaaagtgactcgtatcgttgatttcggtgcatttgtagcc
atcggcggcggtaaagaaggtctggttcatatttctcaaatcgctgacaagcgtgtagag
aaagtgacagactacctgcagatgggccaagaagtgccagttaaagtaatggaagttgac
cgccaaggccgtatccgcctgagcatcaaagaagccactactcctgacgcagaagctccg
gcaccagaagcagcagagtaa
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