Yersinia massiliensis: DA391_19815
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Entry
DA391_19815 CDS
T05402
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yma03016
]
DA391_19815
Enzymes [BR:
yma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DA391_19815
Transfer RNA biogenesis [BR:
yma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DA391_19815
Prokaryotic type
DA391_19815
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AVX39703
UniProt:
A0A2R4NUA1
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All DBs
Position
complement(4287317..4288261)
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AA seq
314 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQAQMDAALDRFRGDSQ
QIPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSERMVTLEQLSAMVEAAQAEERSPNPELDLL
LLPMDSAVVNFPEVNLLPAVAAYVKQGQPVHVAGAPNEGMVRITEGEERNFIGIGTIAED
GRVAPKRLVVEYAE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgacgttttacagaaagtaaaacgtctctttagtgctaaccga
gctgggcataccggtgcgcttgatccactggcgaccggtatgttacctatctgcttaggt
gaagccaccaagttctctcaatttttgctggattcagataagcgttatcgtgtggtggct
cgtttagggcaacgtactgatacttctgacgctgaaggcgcattaatcagtgagcgggaa
gtcaacgtgactcaggctcaaatggatgctgcactggatcgttttcgtggcgatagccag
caaataccgtcaatgtattctgcattgaagcatcagggcaaaccgctgtatgaatatgcc
cgtcaggggattgaagtcgagcgtgaggcacgtagcatcaccgtgtacgagttgcttttt
attcgctgggaaggcaacgatctcgagttagaaatccactgttccaagggcacctacatt
cgcaccattatcgatgatttgggtgagttgttaggttgcggtgcgcatgtgagttatttg
cgccgcttacaagtggcgacttatcctagtgagcgcatggtgacgttagaacagctgtca
gccatggttgaagcggcacaggcagaagaacgttcgccaaatcctgaactggatctgttg
ttgcttccaatggacagtgcagtagtcaatttccctgaagtcaacctgttaccggcagtg
gcggcctatgttaaacaaggtcaacctgtacatgtcgctggtgcaccgaatgaagggatg
gtccgaatcaccgaaggtgaagaacgtaacttcatcggaattggtaccatcgcagaagat
ggtcgagttgcaccgaaacgcttggttgtagaatacgccgagtag
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