Yersinia massiliensis: DA391_21185
Help
Entry
DA391_21185 CDS
T05402
Name
(GenBank) pathogenicity island 2 effector protein SseC
KO
K15345
secreted effector protein SseC
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yma02000
]
DA391_21185
Transporters [BR:
yma02000
]
Other transporters
Pores ion channels [TC:
1
]
DA391_21185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
FIST
CsbD
Motif
Other DBs
NCBI-ProteinID:
AVX39943
UniProt:
A0ABM6UYC5
LinkDB
All DBs
Position
complement(4551009..4552475)
Genome browser
AA seq
488 aa
AA seq
DB search
MSSVIDFKNDMPPDWTTALVGKTTPLPPTTLPDWRATAGYSPSADINFMSPKVTQQKAQD
ALDRLLVALPQHNGEKGKSDRLYLDRLESIDIKLIVAMAGNLNLSIFSDLCKSISKQIES
ASEVQTFLRDKRVAEYQQQIDKAVEQADKAKKAGIFSAVCDWIIGAVEVVYGAMKLAQGI
LTGDPLALASGAAYVAAGTAGLVKAAAETAMLLGASKEKCQGVIDVAGKVQLGCECLAMV
VDVFQACRAINAARVVTKSAGNVLKSGGSEVLLNAVKGGSEAEIGQLTQQFAKEVSQKVC
SEMAFANGGIEMVEASEMAAAAAKQAASAEVTLVRNITKSFTSAGIEKLVGESTKALVMD
VLKKGVTLTAAEFEQQCVNAIMKRMIKQVIKDICASPLHIIQRCTQGINQINIGQLAIQK
AGLQKEIETLLLSQSFIQFMDDWVEKNKQQQITQLKNISNNAQDTLSQLNDNIQQNGMLQ
TKIANSLS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgtcatcgattttaaaaatgatatgccccctgattggacaacagcattggtt
ggaaaaacgacgccattgccaccgaccactctgccagactggcgagcaactgccggctat
tcgccatcggcggatatcaattttatgtcaccgaaagtgacgcaacaaaaagcccaagac
gcattagacagactgctggttgctttaccgcaacacaatggtgaaaaagggaagagtgat
cgattgtacctagatcgtctcgaaagtattgatataaaacttattgtggcgatggcgggt
aatttgaatctgagcattttttctgacttgtgcaaatcaatcagcaaacaaatagaaagt
gcatcggaggtacaaacatttctacgtgataagcgtgttgcggaatatcaacaacagatc
gacaaagcagttgagcaggcagacaaagctaaaaaagccggtatattcagcgcggtctgt
gattggatcatcggtgcggttgaggtggtttacggtgcaatgaagctggctcaagggata
ttaacgggtgacccgctcgcgttagcctctggtgctgcctatgtcgctgcgggtacggca
ggtttggtcaaagcagccgctgaaacagcgatgttattgggcgcatcaaaagaaaaatgc
caaggcgtcattgatgttgctgggaaggtacaacttggctgtgaatgtttggcgatggtt
gttgatgtcttccaagcttgtcgtgctattaatgcagctcgtgtcgtgaccaaaagtgca
ggtaatgtgttgaaatccggcggaagcgaggtgttgctcaatgcagttaagggggggagt
gaagcggaaatagggcagttgacccagcaatttgctaaggaggttagtcagaaagtttgc
agtgagatggccttcgcaaatggtggaattgagatggttgaggccagtgagatggctgct
gcggcagcaaagcaggccgccagtgctgaagtcacgctcgtacgtaatatcacaaaatct
tttacgtctgccggcattgaaaaattggtgggagaatcgaccaaagcattggtgatggac
gtactaaaaaaaggcgttacgctgacggctgctgagtttgagcaacaatgtgtcaatgcc
atcatgaaacgaatgattaaacaggtcataaaagatatttgtgcttcaccattacatatc
attcaacgatgtacgcaaggcatcaatcaaatcaatattgggcaattagcgatacaaaaa
gcgggtttacaaaaagagattgaaacattactactcagtcaatcttttatccaatttatg
gatgattgggtcgaaaaaaataagcaacagcaaatcacgcaattgaaaaatatttctaat
aatgcgcaagatacactctctcaattaaacgataacattcaacagaatggtatgttgcaa
acaaaaatcgcgaattcattaagttag
DBGET
integrated database retrieval system
