Yersinia massiliensis: DA391_21345
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Entry
DA391_21345 CDS
T05402
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
yma
Yersinia massiliensis
Pathway
yma00730
Thiamine metabolism
yma01100
Metabolic pathways
yma01240
Biosynthesis of cofactors
Module
yma_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DA391_21345
Enzymes [BR:
yma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DA391_21345
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AVX40564
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Position
4583712..4585646
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AA seq
644 aa
AA seq
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MQGVTFPNSQRIYLQGSRPDIQVPMREIQLSPTLIGGGKDDPRYEDNEAIPVYDTSGPYG
DPLAKLDVHAGLPKLRASWIADRQDTEALSTVSSGFTQQRLADEGLDHLRFEHLPRPQKA
IDGKCVTQLHYARAGIATPEMEFIAIRENMGRERIRGEVLRHQHPGQNFGANLPDNITAE
FVRQEVAAGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTR
WGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLE
QAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICQ
ICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQ
MIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEH
LGLPNKDDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPET
ARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQEQAARQEQAANQERATQ
ETQAQPIQIQQSGMEKMSAEFRSRGSELYHSASIRQTEVNDEQA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaggagtgaccttccccaactctcaacgaatctatttacaaggctcgcgacctgat
attcaggttcccatgcgcgagatccagcttagcccaacgttgatcggcggcggcaaagat
gatcctcgctacgaagacaatgaagctatcccggtttacgacacctctggcccctatggc
gacccgctcgctaagctcgatgtccacgccggcctgcccaaattgcgtgctagctggata
gcggatcgtcaagataccgaagcactgagcacggtcagttcaggctttactcaacagcgc
ttggctgatgaaggtctagatcatttgcgctttgagcacctaccacgtccgcaaaaagcc
atcgatggcaaatgcgttacccaacttcattacgctcgggcgggtattgccacaccagaa
atggagtttatcgctattcgcgaaaatatggggcgtgaaaggattcgcggggaagtcctg
cgccaccagcatcctgggcaaaattttggggccaacttgccggataacatcacagcagaa
ttcgtgcgccaagaagttgccgcaggccgcgccatcatccccgccaatattaatcaccca
gaagccgaacccatgattattggtcgaaacttcttggtcaaagtgaacgccaatatcggt
aactcggccgtgacctcctccatcgaagaagaggtggagaaattggtttggtcaacgcgc
tggggggccgataccgtgatggatttgtctacgggccgctatattcatgaaacccgtgaa
tggattctacgtaatagcccagtccccatcggcaccgtgcctatctatcaggcattagaa
aaagtgaatggtgttgccgagaatttaacgtgggaaatgttccgcgatactttgctagag
caggcggaacaaggggtggactattttaccatccacgccggtgtgttactgcgttatgtg
ccgatgaccgcaaaacgtttgaccggcatcgtttctcgcggtggttccattatggcgaaa
tggtgcctttcccatcatcaggaaaacttcctgtatcagcatttccgtgaaatctgccaa
atttgcgcagcctacgacgtttcattatcactgggtgatggcttacgtccaggttctatt
caagatgccaatgacgaagcccagttcgccgaattgcataccttgggtgaattgaccaag
atcgcgtgggaatacgatgttcaggtgatgatcgaagggccgggtcatgttcccatgcaa
atgatccgtcgcaatatgactgaagagcttgagcactgtcacgaagcgcctttttatacc
ttaggcccgctcacgacggatatcgcaccgggttacgatcacttcacctcaggtattggt
gcggccatgatcggttggtttggttgtgccatgttgtgttatgtcacaccgaaagagcat
cttggtctgccgaataaagacgatgtaaaacagggactcatcacttacaaaatagccgct
catgccgccgatctggccaaagggcatcctggcgcgcagatccgcgataacgccatgtcc
aaagcccgttttgaattccgctgggaagatcaatttaatctggctctcgatcctgaaact
gcacgcgcttatcacgatgaaaccttgccgcaagagtccggtaaagtggcccatttctgc
tcaatgtgcggcccaaaattctgctcaatgaaaatctcgcaagaagtacgcgactatgct
gctacgcaagaacaagcggctaggcaagaacaggccgctaatcaagaacgggctacacag
gaaacccaagctcaacctatccagattcagcaatctggcatggaaaagatgtcagctgag
ttccgctctcgtggcagcgagttgtatcacagcgcgagtatccggcagacagaggttaac
gatgaacaagcttga
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