Yersinia massiliensis: DA391_21505
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Entry
DA391_21505 CDS
T05402
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yma
Yersinia massiliensis
Pathway
yma00071
Fatty acid degradation
yma00280
Valine, leucine and isoleucine degradation
yma00310
Lysine degradation
yma00362
Benzoate degradation
yma00380
Tryptophan metabolism
yma00410
beta-Alanine metabolism
yma00640
Propanoate metabolism
yma00650
Butanoate metabolism
yma00907
Pinene, camphor and geraniol degradation
yma00930
Caprolactam degradation
yma01100
Metabolic pathways
yma01110
Biosynthesis of secondary metabolites
yma01120
Microbial metabolism in diverse environments
yma01200
Carbon metabolism
yma01212
Fatty acid metabolism
Module
yma_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DA391_21505 (fadB)
00650 Butanoate metabolism
DA391_21505 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DA391_21505 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DA391_21505 (fadB)
00310 Lysine degradation
DA391_21505 (fadB)
00380 Tryptophan metabolism
DA391_21505 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DA391_21505 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DA391_21505 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DA391_21505 (fadB)
00930 Caprolactam degradation
DA391_21505 (fadB)
Enzymes [BR:
yma01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DA391_21505 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DA391_21505 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DA391_21505 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DA391_21505 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AVX39987
LinkDB
All DBs
Position
4617925..4620114
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLQLHWLENGIAELVFDAPGSVNKLDTKTVANLGEALAVLEKQSELKGLMLRSA
KAAFIVGADITEFLSLFNAPPEKLHQWLVFANDIFNRLEDLPVPTISAINGYALGGGCEC
VLATDFRVASPETRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLVDAVVAPEKLTEAALAILKQAIDGKLDWQAARRPKLEPLKLNATEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKLGRSEALKLETNSFVPLAGSNEARALVGIFLNDQYVK
GKAKKLSKDISAPKQAAVLGAGIMGGGIAYQSALKCVPVVMKDINDKSLTIGMNEAAKLL
NKQLERGKIDGLKMANILATIQPTLDYTGIERAQIIVEAVVENPKIKAAVLAETESLISE
DAVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGAKTSDKTIAAVVAF
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGSDFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAVGFPDRMKKDYRDAIDAMFDSQRFGQKNGQGFYRYTQDAKGKP
RKENDEQVDHLLAPISQPTQKFSDDEIIARTMIPMINEVVRCLEEGIIASPAEGDIALVY
GLGFPPFHGGIFRYLDTIGSANYVEMAQRYAHLGALYHVPAGLRAKAEHNESYYPVAAAL
LDVSTSQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacattacagcttcattggctagaaaatggtattgccgagttg
gtgtttgatgcaccaggttcagttaacaaactggataccaaaacggtagccaatttgggt
gaagccctagctgtattagaaaaacaaagtgaactcaaagggttgatgcttcgttctgct
aaagcagcctttattgtcggtgctgatatcaccgaatttctgtctctgtttaatgcccca
ccagaaaaactgcaccagtggctagttttcgctaacgatatattcaatcgcttagaagat
ttacccgtaccaaccatttccgcaattaatggttatgcattaggggggggatgtgaatgt
gttcttgccactgatttccgcgttgcttcaccggagacccgtattggtttaccagaaacg
aagctaggtatcatgccgggctttggtggttctgttcgtctgccacgcctattaggtgct
gatagtgcactggaaattattgctgcaggcaaagatattattgccaaagatgcactaaaa
gtcgggctggttgatgctgttgtcgctcccgaaaaactaacagaagctgcgttggccata
ctgaaacaagctattgacggcaagctcgactggcaagctgctcgtcgtccaaaactagaa
ccgttgaagttaaacgcaacggaagcagcgatgtgcttcaccattgctaaaggcatggtc
atgcaagtggcgggcaaacactatccagcaccactcactgcggtaaaaacaattgaagcc
gcggccaaattgggccgtagcgaagcactgaaattagaaaccaatagttttgtgccgttg
gcaggttccaatgaagcccgagccttggttggcatattcctgaacgaccaatatgttaaa
ggtaaagcgaaaaagctatctaaagatatcagtgcgccaaaacaggctgctgtattgggt
gctggaatcatgggcggcgggatcgcctatcaatcggcattgaaatgtgtgccggttgtt
atgaaagatattaatgataagtctttgacaatcgggatgaatgaagctgccaagttattg
aataagcagttggaacgcggcaaaattgatggtctgaaaatggccaatatcctagcgact
atacaacctactctagattataccggtattgaacgcgcccaaatcatcgttgaagcggtg
gtggaaaatccaaagattaaagctgctgtgctagcagaaacagaatcactgatcagtgaa
gatgctgtattagcgtctaatacctctacgattccgatcgaccaactagccaagtcactt
aagcgtcctgaaaacttctgcggtatgcacttcttcaaccccgttcatcggatgccttta
gtagagattattcgtggtgctaaaacctctgataagacaattgcggcagtcgtggcattc
gctacacaaatgggcaaaacacccattgtagtaaatgattgccctggcttcttcgttaac
cgcgtcttattcccgtatctggctggatttggcatgttggtcagagatggtagtgatttc
cgtcagattgataaagtcatggaaaaacagtttggctggccaatgggacctgcttatctc
cttgatgtggttggtattgataccgctcaccatgcacaagcagtgatggctgttggtttc
cctgaccggatgaaaaaagattatcgcgatgcgattgacgccatgttcgatagccaacgg
tttggtcagaagaatggccaaggtttttaccgatatactcaggatgcgaagggaaaacca
cgtaaagagaatgacgagcaagtcgatcacttattggccccaatcagccaaccgacccaa
aaattcagcgatgatgaaattattgcccgtacgatgattcctatgatcaacgaagtagta
cgttgtctggaagagggaatcattgctagccctgctgaaggggatatcgcgttagtctac
ggccttggcttccctccattccacggaggtatcttccggtatctcgacaccatcggtagc
gccaattatgttgaaatggctcaacgttacgcccaccttggtgcgttgtatcacgttcca
gcagggcttagagccaaagctgaacataacgagagctattatcctgtggcagcagcgctg
cttgatgtttctaccagtcaaccggcatga
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