Yersinia massiliensis: DA391_22010
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Entry
DA391_22010 CDS
T05402
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
yma
Yersinia massiliensis
Pathway
yma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA391_22010 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yma03021
]
DA391_22010 (rho)
03019 Messenger RNA biogenesis [BR:
yma03019
]
DA391_22010 (rho)
Transcription machinery [BR:
yma03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DA391_22010 (rho)
Messenger RNA biogenesis [BR:
yma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DA391_22010 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AVX40075
UniProt:
A0A0T9QWU0
LinkDB
All DBs
Position
complement(4725163..4726422)
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTEELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctagcccggatgcgtaaacaagatattattttctctattcttaag
cagcatgcgaaaagtggagaagatatcttcggtgacggtgtgttggagatattgcaggat
ggatttggtttcctccgctctgcagacagctcctacctcgccggtcccgacgacatctat
gtatccccaagccaaattcgccgtttcaaccttcgcactggtgataccgttgccggtaag
attcgtccgcctaaagaaggtgagcgttattttgcattgttgaaagttaacgaagttaac
tatgacaaaccggaaaacgcccgtaacaaaatcctgttcgaaaacttaaccccactacat
gctaactctcgtttgcgtatggaacgtggtaacggttcgacagaagatttaactgctcgc
gtactggatttggcatcgccaatcggtcgtggtcaacgtggtctgattgtggcaccgcct
aaagcgggtaaaaccatgctgttgcaaaatattgcgaccagcatcgcttataaccaccct
gattgcgtattgatggtcttgctgattgacgaacgtccggaagaagtcaccgagatgcaa
cgtctggttaaaggtgaagtaattgcttctacctttgatgaaccagcatcccgtcacgtt
caagtcgctgaaatggtgattgaaaaagcaaaacgtctggttgagcacaaaaaagacgtt
atcatcttgcttgactccattacccgtttggctcgtgcctataacaccgttgtacctgct
tcaggcaaagtgctgaccggtggtgtggatgcgaacgccttacaccgccctaagcgtttc
ttcggtgctgcacgtaatgttgaagagggcggaagcctgaccatcattgccaccgcgttg
gttgataccggttctaaaatggatgaagtcatctatgaagaatttaaaggtacaggcaac
atggaactgcacttgtcccgcaaaattgcggagaaacgtgtcttcccagcgattgatttc
aaccgctcgggtacacgtaaagaagagttgctgactaccactgaagagctgcaaaaaatg
tggatcttgcgccgtattcttcatccaatgggtgaaatcgatgcgatggagttccttatc
agcaaactggcaaccgcgaaaaccaacgatcagttcttcgataatatgagacgctcataa
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