Yersinia massiliensis: DA391_22815
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Entry
DA391_22815 CDS
T05402
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yma
Yersinia massiliensis
Pathway
yma03030
DNA replication
yma03410
Base excision repair
yma03420
Nucleotide excision repair
yma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DA391_22815
03410 Base excision repair
DA391_22815
03420 Nucleotide excision repair
DA391_22815
03440 Homologous recombination
DA391_22815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yma03032
]
DA391_22815
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_22815
Enzymes [BR:
yma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DA391_22815
DNA replication proteins [BR:
yma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DA391_22815
DNA repair and recombination proteins [BR:
yma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DA391_22815
NER (nucleotide excision repair)
GGR (global genome repair) factors
DA391_22815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
DUF2529
HHH_5
Prok-E2_E
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AVX40210
UniProt:
A0A2R4NVP9
LinkDB
All DBs
Position
complement(4915380..4918178)
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSSGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRLQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALFSNLDKISTLSFRGSKTMSAKLEQNK
DVAYLSYKLATIKTDVELEVTCDELTVSSPDDEQLHQLFARYEFKRWLADVEAGKWLDGK
KERPTGQGNNKAFVAAEPAPAAEVTAVLSQDNYQTILDEKSLADWIERLKKAEVFAFDTE
TDGLDTLSSNLIGLSFAVAPGEAAYLPLAHDYLDAPEQLDRDWVLATLKPLLEDEKALKV
GQNLKFDQSMLARYGIDLRGIAFDTMLESYVLNSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYASEDADVTLQLHLVLWPKLQQSDGLKRVFQDIEMPLLPVL
SRIERTGVLIDQNILAAHSKELTLRLDELEKQAHELAEEPFNLASPKQLQVILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPKGYRIMAADYSQIELRIMAHL
SQDEGLLAAFAAGKDIHRATAAEVFGLPLENVTTEQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAADQGYVTTLDGRRLYLPDIHSRNATRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQESEPLVRVIMQVHDELVFEVHESVLESA
EQKIRELMEQSMQLAVPLKVDVGVGDNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattgatcctcgttgacggttcctcttacctctatcgt
gcttaccatgctttcccgccgctgaccaatagcagcggtgagccaactggtgcgatgtat
ggcgtgttgaacatgttgcgcagtctgttgctgcaatatcgtccaagccatgttgcggtt
gtttttgatgctaaaggaaaaacgtttcgtgacgagcttttcgcggaatataaatctcat
cgccctcctatgcccgatgatttacggttgcaaatagagccacttcaccaaatggtaaag
gcgatgggattgcctttattagtggtttctggcgtagaggctgatgatgtcattggtaca
ttggcacaagaagcagagaaagccggtcatgctgtattaattagtacgggtgataaagat
atggcgcaactagttacgccgaatatcactctcattaatactatgaacaacgctatttta
gggccacaggaagtgtgcgaaaaatatggcgttcctcctgaattgattattgattttctc
gccctcatgggtgactcatcggacaatattccaggagtgcctggtgtcggcgaaaaaaca
gcgcaggccttattgcaaggtctgggtgggttggatgcactcttcagtaatttagataag
atttctacgctgtcattccgtggctcaaaaacgatgtctgccaagttagagcaaaataaa
gatgttgcttatctttcctataaacttgccaccattaaaacggatgttgaactggaggtg
acctgcgatgaactgaccgtttcctcaccggatgacgagcagttacatcagctattcgcc
cgttacgaatttaagcgttggttggcagatgtcgaagccggtaaatggctagacggtaaa
aaagagcgaccaacagggcagggcaacaataaagcgtttgttgcagcagagccggcaccg
gccgctgaagtgacggcggtattatcgcaagataattaccaaaccatcttggatgagaaa
tccttagcggattggattgaacgcttgaaaaaagcggaagtcttcgcctttgatactgaa
actgatggcctcgatactcttagcagcaatttgattggtctgtcttttgctgtcgcgccg
ggtgaagctgcttatctgccgttagcgcatgattatcttgatgcccctgaacagctcgat
cgtgattgggtgctcgcgacgctaaaaccgctgttggaagatgaaaaagcgcttaaagtt
gggcaaaacctcaagtttgatcaaagtatgctggcgcgttatggcattgatctgcgtgga
atcgcttttgataccatgttggaatcttatgttctaaacagtgtagcgggtcgtcatgac
atggatagcttggcggaacggtatctcaaccataagaccatcacttttgaagagattgcc
ggtaaaggaaagaatcagctgacgtttaaccaaattgcattggagcaagctgggccatat
gcatcagaagatgctgacgtcaccctacagttgcacttggttctatggccaaaattgcag
caaagtgatggcttgaagcgagtgttccaagatattgagatgccattgctgccagtattg
tcccgcattgagcgtaccggcgtattgattgaccaaaatatattagcagcgcactccaaa
gagctcactcttcgtctcgatgagctggaaaaacaggctcatgagctggctgaagaacct
ttcaatttggcatcacctaagcagctacaggtgattttgtatgaaaaacaaaaattgccg
attttgaaaaaaacgcctggcggcgcggcgtccactaatgaagaagtgctcgcggagttg
gcgctggattatcccctgccgaaagtcatcctcgaataccgtggattggcaaagctaaaa
acaacctataccgataagttaccgttgatgattaaccccgtctcgggccgggtccatacc
tcttatcatcaagctgtaacggccacagggcgtttgtcatcccgtgatcctaacctgcaa
aatattccggtgcgcaatgaagaagggcgtcgtatacgtcaggcttttatcgcgccaaaa
ggttaccgcatcatggcggccgactattcgcagattgagctgcgaatcatggcacatttg
tcacaggatgaaggattgttggctgcgtttgctgctgggaaggatattcaccgcgcgaca
gcggcagaagtctttggtttgccattagaaaacgtgacaaccgagcagcgtcgtagtgct
aaagccattaactttggcttgatttatggcatgagcgcatttggtttagcgcggcagttg
aatatccctcgtggtgaagcacagcgttatatggatctctactttgagcgctatccgggt
gtgctggaatacatggagcgcactcgcaaacaagccgcggatcaaggctacgtcaccaca
ttggatggccgccgtctctatctgcctgatattcactcacggaatgccactcgtcgtaag
gccgctgaacgtgaagctatcaatgcgccaatgcaaggaactgctgccgatattatcaaa
cgagcgatgatcgcggtggatgcttggttgcagcaagaatctgagcctttggtgcgggtt
atcatgcaagtacacgatgaattggtatttgaagtgcatgaaagtgtattggaaagtgct
gagcagaaaatccgcgagctgatggagcagagtatgcaactggcggtacctttgaaggtt
gatgtcggggttggagataattgggatcaggcacactaa
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