Yersinia mollaretii: HRD69_00330
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Entry
HRD69_00330 CDS
T06716
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ymo
Yersinia mollaretii
Pathway
ymo03030
DNA replication
ymo03430
Mismatch repair
ymo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRD69_00330 (dnaE)
03430 Mismatch repair
HRD69_00330 (dnaE)
03440 Homologous recombination
HRD69_00330 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ymo03032
]
HRD69_00330 (dnaE)
03400 DNA repair and recombination proteins [BR:
ymo03400
]
HRD69_00330 (dnaE)
Enzymes [BR:
ymo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRD69_00330 (dnaE)
DNA replication proteins [BR:
ymo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HRD69_00330 (dnaE)
DNA repair and recombination proteins [BR:
ymo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HRD69_00330 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QKJ05175
LinkDB
All DBs
Position
complement(67973..71455)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHGA
GVKPIIGADFYVQSEILGDELAHLTVLARNNEGYQNLTLLISEAYQRGYGAAGPIIDRDW
LIKHKEGLILLSGGRMGDVGRFILRGNQAQVDQCLEFYQEHFPDSYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEEQMCELFADIPEALLNSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDFLVEKSKQGL
EERLELLFPDPEERAQKRAEYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDIASIPLEDQKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKNQGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAMLEARKEGGHFKELFDLCARVDTKKLNRRILEKLIMSGAFDRLGPHRAALMS
SLGEALKAADQHAKAEAIGQADMFGVLADAPEQVEQSYANVPPWQEQIVLDGERETLGLY
LTGHPITQYLKEIERYAGGQRLKDMHPTDRGKMTTAVGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgtccacctgcgtgttcacagcgactactccatgatcgatgga
ttagccaagattgggcccttggtgaaaagagctgctgcgctaggtatgcccgctctggcc
atcaccgatttcaccaatctttgcggcttggtgaagttctacggtagcgctcatggtgcc
ggggttaaacctatcatcggtgcagatttctacgtacaaagcgaaattctgggtgatgaa
ttagcccatctcactgtactggctcgcaataacgaaggttatcaaaacctaactttactg
atctccgaagcctatcaacgtggttatggcgctgctggtcctatcattgatcgtgattgg
ttaattaagcataaagaggggctgattctgctgtctggtggtcggatgggggatgtcggc
agatttatcttgcgcggaaatcaggctcaagttgatcagtgccttgagttttaccaagag
catttccctgacagctactatttagaattgattcgtaccggtcgcccggatgaagagaac
tatctacatgccgccgttgccttagccactgagcgtggcttgccagtagtggcgaccaat
gatgtgcgctttatcgatgaatcggattttgatgcgcatgagatccgtgtcgccatccat
gacggttttacgctggttgatcctaaacggcccaaaaattacagccctcagcagtttatg
cgcgacgaagagcagatgtgtgagctattcgcggatatcccagaggcgctgctcaacagt
gttgagattgccaaacgttgcaatgtgaccatccgcctcggggagtatttcttaccacaa
tttccaactggcgagatgagtacagaagattttctggttgagaagtcgaaacaaggttta
gaagagcggctcgagctgctcttcccagaccctgaagagcgcgcgcagaaaagagctgaa
tacgacgagcgtctagaaatagaactaaaagtcattaaccagatgggttttcctggttac
ttcttgatcgtaatggaatttatccagtggtcgaaagataatggtgtacctgtaggaccg
gggcgtggttcgggtgcgggttctttggttgcgtatgcgctgaaaattactgacctcgat
ccattggcatttgacctgctgttcgaacgttttctaaacccagaacgtgtctcaatgccc
gacttcgacgttgacttctgtatggaaaaacgtgatctggtgattgagcatgtcgcggat
atgtatggccgtgatgcagtttcccagatcatcacgtttggtaccatggcggctaaagcg
gtcatacgagatgtgggccgtgtactggggcacccctacggttttgtcgatcggatatcc
aagttagtcccaccagatccgggtatgacactggaaaaagctttcgcagcagaacctcaa
ctgcctgaaatttatgaggcagatgaggaagtcagggcgctgatcgatatggcgcgtaag
ctggaaggggtaacacgtaacgccggtaaacatgctggtggtgtggttatcgcaccgact
aaaattacggatttcgcgccgctctattgtgatgcggaaggcaacaaccccgtcacccag
ttcgataaaaatgatgtggaatacgcaggattggtgaagttcgacttcctcggtttgcga
acacttactatcattaactgggcgctggagatgattaacgctcggcgcgctaaaacgggg
ctagagccaatagatatcgcctctattccgctggaagatcaaaaaagtttcgatatgctg
caacgttcggaaacgacagcagtattccagcttgaatccagaggcatgaaggatcttatc
aagcgcctgaaacctgactgcttcgaagacatgatcgcattggtggcgttgttccgcccc
ggcccgctgcaatcagggatggtagataactttatcgaccgtaaacacggccgtgaagcg
atatcatatccggatattgagtggcaacatgagtcattaaaaccggtgcttgagccgacg
tatggcatcattttgtaccaagaacaggtcatgcagattgcgcaggttctgtccggctat
tcactcggtggcgcagatatgttgcgtcgtgcgatgggtaagaagaaccctgccgagatg
gctaaacagcgctcggtatttgaagatggggcgaaaaatcagggtgttgacggtgagctg
gcgattaagatttttgacctagtagagaaatttgccggttacggttttaacaaatctcac
tccgcagcatacgcattggtttcttaccagacgctttggctgaaagcacattatccggct
gaatttatggcggcggtaatgaccgctgatatggataacactgataaagtggtgggtctg
gtcgatgaatgctggcgtatggggctgaaaattctgcctcctgacatcaacagcgggctg
tatcatttccatgtcaatgatgagggcgaaatcgtttatggcataggagccatcaaaggt
gtgggcgaggggccaattgaggccatgctggaagcccgtaaagagggcggccacttcaaa
gaattatttgatttgtgtgccagagtggacaccaaaaagctcaatcgtcgaatcttagaa
aaactgattatgtccggtgcttttgaccgcttggggccgcaccgtgccgcattgatgagt
tcattgggcgaagcattaaaagcggctgaccagcatgccaaggctgaagctattggtcag
gcagatatgtttggcgtattagctgatgcacctgagcaggttgagcaatcttatgctaat
gtgccgccgtggcaggaacagattgtcttagacggagagcgggaaacgctggggctatat
ctgaccggtcacccgatcacccaatatctcaaggagatagaacgttatgccggcgggcag
cgtttaaaagatatgcatccgacggaccggggcaaaatgaccacggcagtggggctggtt
atcgctgcaagggttatggtaacaaaacgtgggaatcgcattggtatttgcactttggat
gaccgctccgggcgtctggaggtgatgctattcaccgatgcgttggaaaaatatcagcat
ttattggaaaaagaccgtatcctgatagccaccggacaggtcagctttgatgactttagt
ggtggacttaaaatgaccgcccgtgagttaatggacatcagtgaagctcgtgaaaaatat
gcccgtgggcttgctatatcgctgaccgacaggcaaattgatgaccagcttttgaaccgt
ctccgtcaatcgttggaaccccatcgagcggggacgatcccagtgcatctttattaccaa
cgggaagatgctcgcgcccggctgcggtttggagccacatggcgcgtgacgcccaccgat
cgtttattgatagatttgcgaacgctggtaggtaatgagcaggtggaactggaatttgac
taa
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