Yersinia mollaretii: HRD69_00750
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Entry
HRD69_00750 CDS
T06716
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ymo
Yersinia mollaretii
Pathway
ymo03410
Base excision repair
ymo03430
Mismatch repair
ymo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRD69_00750 (recJ)
03430 Mismatch repair
HRD69_00750 (recJ)
03440 Homologous recombination
HRD69_00750 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ymo03400
]
HRD69_00750 (recJ)
DNA repair and recombination proteins [BR:
ymo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HRD69_00750 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HRD69_00750 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HRD69_00750 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
FAM212
Motif
Other DBs
NCBI-ProteinID:
QKJ01656
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Position
complement(167329..169062)
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AA seq
577 aa
AA seq
DB search
MTLKTQLRRREVADDSHLPPQLHPLLRRLYASRGVKSAEELERGVKGLLAWQQLDGIDVG
VTLLQQALADRRRIVIVGDFDADGATSTALAVLALRSMGGSNIDYLVPNRFEDGYGLSPE
VVEQVAARGAELIVTVDNGISSHAGVDLAHAKGIQVLVTDHHLPGETLPAAEAIINPNLA
GCDFLSKSLAGVGVTFYLMLALRARLRESGWFEQRALAIPNLAELLDLVALGTVADVVPL
DANNRILVHQGLSRIRAGKCRPGIRALLEVANRDARQLAANDLGFSLGPRLNAAGRLDDM
SIGVALLLSDDIAQARALAIDLDTLNQTRREIEQGMQVEALQLCDQLERTSTELPYGIAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGLLKGSGRSVAGLHMRDALERLDTLNP
GLILKFGGHAMAAGLSLEQDKFDEFRQCFADLVGEWMDASQLEGVIWSDGELQGNDLSIE
TAELLRDGGPWGQSFPEPTFDGKFRILQQRLVGERHLKLMIEPLNGGPLLDGIAFNIDTT
LWPDSSVREVKLAYKLDINEYRGNRSVQLLIQHLWPY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgacactgaaaactcaacttcgtcgtcgtgaggtggcagatgacagccatctgccgcca
caattgcacccgctgctgcgccgtctctacgccagtcgtggcgtaaaaagtgccgaggaa
ttggagcgcggcgttaaagggttgttggcatggcagcaactcgacggcattgatgtcggt
gttaccttactacaacaagcgctggccgatcggcggcgtatcgtgattgtcggtgatttt
gatgccgatggcgcgacgagtacggcattggcggtgctagcgttacgtagtatgggcggc
agcaatattgattacctagtgccaaatcgctttgaagatggctatgggcttagccctgaa
gtcgtcgagcaagttgctgcccgtggcgcggaactgatcgtcacagtcgataacggaatt
tcctcccatgcgggagtggacttggcccatgccaagggcattcaggtgttggttaccgat
caccatttaccgggcgaaaccttgcctgcggctgaagccattattaacccaaatctggcc
ggatgtgattttctctccaaatcgctggcgggggtaggagtcaccttctatctgatgtta
gcgttgcgcgcccgtctcagagagagcggctggtttgaacaacgtgcgctagccataccc
aatttggctgaattgctggatttagtggcactcggcaccgtggcagatgtggtgccgctg
gatgccaacaaccgaattctggtacaccaaggtcttagccgcatccgtgcgggaaaatgc
cgtccgggaattcgcgcgttactggaagtggccaatcgtgatgctcgtcaactggcggcg
aacgatttgggtttctccctcggtccacggctaaatgccgctgggcgtctggatgatatg
tctattggagtggcactgctgctcagtgacgatattgctcaggcccgcgcactggcaatc
gatcttgatacactaaaccagacgcgccgtgagatagagcaaggtatgcaggtcgaagcc
ctgcaactgtgtgaccaattggagcgcaccagcactgaattaccttacggtatcgcgatg
tatcatcctgagtggcatcagggcgtagtggggattctggcctcacggattaaagagcgt
tttcaccggccggttatcgcttttgctccggcgggggaggggttactgaaaggctcgggc
cgtagtgttgctggtttacatatgcgtgatgcccttgagcgcctcgacaccttgaaccca
ggattgattctgaagtttggcggacatgctatggcggccggattatcgctagagcaggat
aaattcgatgaattccgccagtgctttgcagatttagtcggtgaatggatggatgcctcc
caattggaaggtgttatctggtctgatggcgagctgcaaggcaacgacttatcaatcgaa
acagcagagctgctgcgcgatggtggtccgtgggggcaatccttcccagaaccgacattt
gacggcaaattccgcattttacaacagcggctggtgggtgagcgccacttgaaactcatg
attgagccattgaatggcgggccgttgctggatggcattgcctttaatatcgataccacc
ttatggccggacagcagtgtgcgtgaagtcaaactcgcttataaactcgatattaatgag
tatcgcggtaaccgaagtgtccagttattgattcagcacttgtggccctattaa
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